Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00797 ATGGCCACTCAGGCTCTTGTTTCATCCTCGTCTCTAACCTCTTCAGTGGGCGCTGCCAGACAGCGATTAGGACCAAAGCCCTCCCTTGGTTCCTCCAGAAAGGCCGCTTCTTTCGTTGTTAGAGCTGAAGCCACTCCTCCTGTTAAGCAAGGAGCTAACAGACAATTATGGTTCGCTTCTAAACAAAGTCTTACATATTTGGATGGAAGTCTTCCGGGCGATTACGGGTTCGATCCATTGGGACTATCAGACCCCGAGGGCACAGGAGGGTTCATCGAGCCGAGATGGTTGGCATACGGCGAGGTGATCAACGGGAGGTTTGCGATGTTAGGAGCCGCAGGAGCCATTGCCCCAGAGATCTTTGGATCACTAGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACTGGAGTGATCCCACCAGCAGGAACCTACAACTACTGGGCAGACCCCTACACACTGTTTGTGTTTGAGATGGCTCTAATGGGTTTTGCTGAACACAGAAGATTTCAAGATTGGTACAACCCAGGATCCATGGGAAAGCAATACTTCTTAGGGTTAGAGAAGTTCTTGGGTGGGTCAGGTGACCCTGCTTACCCAGGTGGCCCCTTGTTCAACCCTTTAGGGTTTGGAAAAGATGAGAAATCAATGAAGGAATTGAAGCTGAAGGAGATCAAGAATGGGAGGCTTGCAATGTTGGCTATCTTGGGTTACTTCATACAAGGCCTTGTCACTGGTGTTGGCCCTTACCAAAACCTTTTGGACCATTTGTCTGACCCTGTCAACAACAACGTTTTGACAAGCCTTAAGTTCCACTAG 825 49.33 MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4703072 4704880 - Carg22685-RA Car11g00797 156750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00797 274 Gene3D Chlorophyll a/b binding protein domain 55 273 - -
Car11g00797 274 Pfam Chlorophyll A-B binding protein 65 243 IPR022796 -
Car11g00797 274 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 273 - -
Car11g00797 274 SUPERFAMILY Chlorophyll a-b binding protein 53 270 - -
Car11g00797 274 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 273 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00187 Car-Chr10:901163 Car11g00797 Car-Chr11:4703072 6.08E-49 dispersed
Car11g00797 Car-Chr11:4703072 Car12g00507 Car-Chr12:3351210 2.81E-53 dispersed
Car10g00793 Car-Chr10:4359492 Car11g00797 Car-Chr11:4703072 4.57E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00797 K08909 - csv:101202993 528.094