Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car11g00800 | ATGAACGCGCTCGAGGCTGGATCAAGTTCAAACGTCTCGTCTATGTGTGAAAAGATATCAAAATCTGGAATCAATCCCATGACAGCCTCTGACCATCTCTTGGATGCTGTAGTATCCAGAGGCCATTCTGCAGATGATAGCACTTCTTGTCGGACGACATTGACTAAAATCAGTAGCTCCTCTGGTCCGAGTAGCTCGGTTTATGGACAGCCAAATGCATCCAATCTCATGCAGGGGGGAGTTTTTGGTGTCCCCAAGTCCCTAGATATGGCAAATTGCTCTCAAAGTTCTTCAGTATATGGATCTCAAATCAGTTCATGGGTTGAACCAGGCGATAACTTGAAGCGTGACAGTAGTGTGTCGACAGCCTATTCTAAGAGGCCTGATGAAGTGAACAAATCGAGTCGTAAAAGACTTAAACCTGGAGAGAATCCTAGACCGAGGCCGAAAGATCGCCAGATGATACAAGATCGTGTAAAGGAGTTGCGGGAGATCGTGCCAAATGGAGCAAAATGTAGCATAGATGCATTACTTGAAAAAACCATCAAGCATATGCTTTTCCTACAAAGTGTTACAAAGCATGCTGACAAGTTGAAACAGACCGGAGAGTCTAAGATCACGAGCAAAGAAGGCGGACTCTTTCTTAAAGACAACTTTGAGGGTGGGGCGACGTGGGCGTTTGAGGTTGGTTCGCAAACTATGGTTTGTCCTATCATAGTCGAGGATTTGAATCCGCCACGTCAGATGCTTGTGGAGACGCTTAAAGGCAACGTGTCGATGGCAAACGCGATAGATAACAGCCATATGATCGTCCACAACTCCTTCTCTCAGTCGACCCCAATCGCTGCAACTGGCAGGCCT | 861 | 46.57 | MNALEAGSSSNVSSMCEKISKSGINPMTASDHLLDAVVSRGHSADDSTSCRTTLTKISSSSGPSSSVYGQPNASNLMQGGVFGVPKSLDMANCSQSSSVYGSQISSWVEPGDNLKRDSSVSTAYSKRPDEVNKSSRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKITSKEGGLFLKDNFEGGATWAFEVGSQTMVCPIIVEDLNPPRQMLVETLKGNVSMANAIDNSHMIVHNSFSQSTPIAATGRP | 287 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 4722660 | 4724866 | - | Carg22688-RA | Car11g00800 | 156753 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car11g00800 | 287 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 139 | 188 | IPR011598 | GO:0046983 | |
| Car11g00800 | 287 | MobiDBLite | consensus disorder prediction | 107 | 153 | - | - | |
| Car11g00800 | 287 | MobiDBLite | consensus disorder prediction | 42 | 72 | - | - | |
| Car11g00800 | 287 | MobiDBLite | consensus disorder prediction | 129 | 153 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car11g00800 | Car-Chr11:4722660 | Car16g01153 | Car-Chr16:9830359 | 1.84E-48 | dispersed | |
| Car10g00791 | Car-Chr10:4326396 | Car11g00800 | Car-Chr11:4722660 | 2.52E-11 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car11g00800 | - | - | cmos:111437266 | 490.73 |