Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00811 ATGGGTGTTTCAGGAAAATGGTTCAAAGCGTTAGTCGGTTCGAAGAAATCGGAAAAATCTCAGTCATCAGAACATGACGAAAATGCGAGGACAGTTACGAACAAGTTTTGGCATCGGAGAAAGCATTCTGTTGATATCGATGCTGATAAACTTCAGCACGAGTTCAATTCAAACTTTACCTCATTTGTTGAAGAGTCCAATGCCCTTTCGGATCCAGAAGCCGCTTCTATTCCTTCTGGTTCACTTCAAACATGTGATGCATTGCGTAGTCGACAGAATGATATAGAAGAACAGGCGGCTATACGTATCCAAACAATGTTTCGATCGTTTCTGGCTAGAAGAGCTCTCCGAGCTCTGAAGGGATTGGTTAGACTTCAAGCTCTTGTTAGGGGTCATGCTGTCAGAAAACAAGCTGCAATAACTCTTCGCTGTATGCAAGCTTTAGTGAGAGTCCAGGCTCGTGTTCGAGCAAGGCGTGTACGTATTGCATTGGAAAGTGAAACTGCACAGCAGAAAATTCAACAACAACTTGAAAACCAAGCCCGTGTTCGTGAAATTGAAGAAGGTTGGTGCGACAGTGTTGGATCGGTTGAAGAGATTCAAGTAAAATTATTAAAAAGGCAGGAGGCTGCAGCTAAGCGTGAGAGAGCTATGGCATATGCTCTGGCTCATCAGTGGCAAGCAGGATCGAGACAGCAGGCTGCCCTCTCCGAGTTCGAACCTGATAAAAGCAGCTGGGGTTGGAACTGGTTGGAAAGATGGATGGCTGTTCGTCCATGGGAAAACCGCTTTCTCGATATTAATCTCAGAGACGGAGTGATGATTCACGAGAACGGATCAGCTGAGGGAAAAAGTAACACGAAATCCTATTCAAAAACGACCAGCAAGAAACCAAACTTAGTGACTGATCAATCAAACCTCTCAAGCCAAAAAACCGCTGCCTCACACTCTGATGGATATGGTTCATCATCTCCCACTCAATCACCTGGCATTGTAGAGGTATCCAGTGCACAGATTCAAAAGCCAAAGTATAAAGTTCGACCTGAGAGGCCATTCGACGAAGTCAAGCCTAAAGTAGATACCGGTTTGAGATCCCATAGCAATCCGAAAGAGAGATCCACGCCATTGGTAAAAAACGCTAAGAAGCGATTATCCATGCCTAACAATGTTGCAGACCCCGGTAGTCAAAATCAAAGGGCGAGAAATTCCAATAGAACTGCTGCTGGCAAAGTGACCGTGACCAAGTCCGTCAACGACAAACTCAAGCCGATTGCAAGAGGTGACTCGAAACCTGCAAACCCCGGATCACAGAACTGA 1317 45.41 MGVSGKWFKALVGSKKSEKSQSSEHDENARTVTNKFWHRRKHSVDIDADKLQHEFNSNFTSFVEESNALSDPEAASIPSGSLQTCDALRSRQNDIEEQAAIRIQTMFRSFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRIALESETAQQKIQQQLENQARVREIEEGWCDSVGSVEEIQVKLLKRQEAAAKRERAMAYALAHQWQAGSRQQAALSEFEPDKSSWGWNWLERWMAVRPWENRFLDINLRDGVMIHENGSAEGKSNTKSYSKTTSKKPNLVTDQSNLSSQKTAASHSDGYGSSSPTQSPGIVEVSSAQIQKPKYKVRPERPFDEVKPKVDTGLRSHSNPKERSTPLVKNAKKRLSMPNNVADPGSQNQRARNSNRTAAGKVTVTKSVNDKLKPIARGDSKPANPGSQN 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4806138 4811574 - Carg22699-RA Car11g00811 156764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00811 438 MobiDBLite consensus disorder prediction 389 413 - -
Car11g00811 438 MobiDBLite consensus disorder prediction 280 335 - -
Car11g00811 438 Pfam IQ calmodulin-binding motif 98 117 IPR000048 GO:0005515
Car11g00811 438 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
Car11g00811 438 MobiDBLite consensus disorder prediction 343 367 - -
Car11g00811 438 ProSiteProfiles IQ motif profile. 120 147 IPR000048 GO:0005515
Car11g00811 438 MobiDBLite consensus disorder prediction 278 438 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01342 Car-Chr1:11925877 Car11g00811 Car-Chr11:4806138 7.80E-56 dispersed
Car09g00291 Car-Chr9:1565094 Car11g00811 Car-Chr11:4806138 1.96E-50 dispersed
Car11g00811 Car-Chr11:4806138 Car15g00406 Car-Chr15:2112389 2.10E-50 dispersed
Car16g00380 Car-Chr16:2341810 Car11g00811 Car-Chr11:4806138 6.30E-33 transposed
Car10g00782 Car-Chr10:4247644 Car11g00811 Car-Chr11:4806138 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00811 - - cmax:111495471 774.237