Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00833 ATGAGGAAATTAGGAGTACTGGTGTTGCTTTGGAGTGCATCGATACTTCTTCCGAACCATAATCGTTGGCTTACAGAAGCAGCTCCGGCGAATTCGGCGGTGACTCACTTGCCCGGCTTCACGGCCGGCGATTTCCCGTCCAAACACCACTCCGGGTATATAAATATCGACGGAGGTTCGAGTGGGAAGAGGCTGTTTTATTACTTCGTGACGTCGCAACGGAGCCCCGCCGCCGATCCGGTGGTTCTCTGGCTCAACGGCGGCCCTGGCTGCTCTAGCTTCGACGGCTTTGTTTATGAACACGGACCTTTCAATTTTGGAGAAGGAAATCCCAAGGGGACACTCCCTACCTTACATCTTAATCCTTACAGCTGGTCCAAGGTTTCAAATATTATATATTTGGATTCCCCAGCTGGTGTTGGCTTATCCTATTCCCCAAACGAGGCCAATTACAATACAGGAGATCTTCAAACGGCTTCTGATACACACATTTTTCTTCTCAGATGGTTTGAGGAATTTCCAGAATTTCTTCAAAATCCATTTTACATAGCAGGAGAGTCCTTCGCAGGCATCTATGTCCCCACCCTTGCTTCTCAAGTAGTCCAAGGGCTTAAAAATGGGGCTGTCCCAATTATAAATTTCAAGGGTTACATGGTGGGGAATGGTGTGACGGATGAAAAGTTTGATGGCAATGCTCTCGTCCCTTTTGCACATGGAATGGCCCTAATCTCTGACGCTATGTTTCAGGAAACTGAAGCTTCTTGTGGTGGAAATTACTACGACCCTCAAACGGAGGCCTGTTTTGACAAGCTTGAACGGGTTGATCAGGACTTGGAGAAGTTAAACGTATACGACATCTTGGAGCCATGTTTTCACATAGGAAACACGAGCGAAAGCTTGCCTACAAGTTTTCAACAACTTGGGCAGACAAAGAAGCCTTTAGCCGTAAGGAAGCGGATGTTCGGTCGGGCTTGGCCTTTTAGGGCACCGGTGCGCGATGGGATCGTCCCTCTTTGGTCTGAACTAGCTGAGACCGACATCAAATCTCATGTCCCTTGTCTGAACGATGAAGTAGCAACGATTTGGTTGAACGACGAGTCGGTGAGAGCAGCCATTCATGCCGAGCCGGAAAGTGTGGCGGGTACATGGGAGCTATGTACTCATAGAATAAGGTACCGTCACAATGCTGGAAGTATGATTCCTTATCATAGGAACCTTACTTCTCAAGGTTTTAGAGCTCTTATTTTCAGTGGAGACCATGATATGTGTGTGCCATACACTGGAAGCCAAGCATGGACTTCTTCACTTGGCTACAAAATTGTTGATGAATGGAGGCCATGGTTCTCCAATGCCCAATCAAAACTCGTTTACAACCCGCGAAAGGATTCTTCATCGGTTGATTGCTTGTTTGTTGCATCTTCCGGTCGTTTTCCCCACTCAATCATTCAACCCCGCATTTGGTCGTCTTCAAATCCGAAGTCGTTGTTTAAAGATGAATTCATTCTGCCAAATTCTGGGAATCGTTCGTTTTTGGCTCTGTTTGTTGGTTGGTCTTATCGCGATCTTGAATTTGAATTAGAATTTATTGGAGGTCCGTATTCAAGCATTCTAGGAGTCCCCATTTCCAGAATGGGGCCTTGCTTGTCTGTTGGATGTAAGAGGGCCATGGCTGGTTCCTCTGTATCTTCTGTGCTGGAAGCAAGAAAACTGAAAGACTCAGAAAATGGGCTGGAGTCCAAGGATTCTATGTTTGAGCAGCAGAGTGAAGAAGCAACAGTTCACCGAATTCCGGGTCGGATGTTCTTGAATGGATCCAGTGAAGTTGCCTCACTTTATACTCAACAGGGCAAGAAAGGGATGAACCAAGATGCCATGATTGTATGGGAGCACTTTGGCTCAAGAACAGATACATTCTTCTGTGGAGTTTTTGATGGCCATGGTCCTAACGGTCATCTGGTCGCGAAAAGAGTGAGGGATTCTCTGCCCCTGAAACTGACTGCACATTGGGAAGCTAATGCAAGCAATGAGGATATTTCAAAAGAGTTTGGTCATAAAACAGGTCTCAACAATGAAAATTCTGGGTTAGAAACTGATTGGAAGGAAGCTAGTTCTCCCCTTAAGCACCATGAAATTTCTGAAAATATGAAGGAATCATTTTTGAAGGCTTTTAAGAGAATGGATGTGGAACTCAAAATGCAGCCAAGTATTGACTGCTTCTGTAGTGGGACAACAGCAGTAGCTCTTGTTAAGCAGGATCGAGATCTTGTTATTGGAAATGTTGGGGACTCTCGAGCTGTGTTGGGTACCAGAGACAAGGATAATTGTCTCCAAGCAGTTCAGTTGACCATAGATCTCAAGCCAGATATTCCAGCGGAAGCAGAGAGAATTCTCCAATGCAAGGGTCGGGTATTTGCCCATGAGGATGAACCAGAAGTTGCTAGGGTATGGCTTCCAAACAATGATTCCCCTGGGCTGGCAATGGCACGATCTTTCGGCGACTTTTGCCTCAAGGACTTCGGTCTAATTTCTGTTCCTGAAATTTCGTATCGGTTTCTGACGGACGAAGACGAGTTTATAGTTTTAGCTACCGACGGAATTTGGGATGTTCTCTCAAACAAAGAGGTAGTCGACATTGTGGCATCGACCCCAGCTCGTTCTGCAGCTCAATCATTGGTTGAGTCTGCAACTAAAGCATGGAGGCGCAAGTTTCCTTTTTCCAACATTGACGACTGTGCTGTTGTGTGCCTCTTCCTCGACTCGAACTTGATGGTATCAGATATGAATGTTAAATCCCAGGAGGATAGTTCAGCAGTTCAAGCTGAGACAGCCATGGTGGATGATGATGTCTCAGGCGCAGCTGGTCTACGGTGTTCGGAAATCGTGCAAACAGTAGGAGTTTCTACATGA 2907 46.16 MRKLGVLVLLWSASILLPNHNRWLTEAAPANSAVTHLPGFTAGDFPSKHHSGYINIDGGSSGKRLFYYFVTSQRSPAADPVVLWLNGGPGCSSFDGFVYEHGPFNFGEGNPKGTLPTLHLNPYSWSKVSNIIYLDSPAGVGLSYSPNEANYNTGDLQTASDTHIFLLRWFEEFPEFLQNPFYIAGESFAGIYVPTLASQVVQGLKNGAVPIINFKGYMVGNGVTDEKFDGNALVPFAHGMALISDAMFQETEASCGGNYYDPQTEACFDKLERVDQDLEKLNVYDILEPCFHIGNTSESLPTSFQQLGQTKKPLAVRKRMFGRAWPFRAPVRDGIVPLWSELAETDIKSHVPCLNDEVATIWLNDESVRAAIHAEPESVAGTWELCTHRIRYRHNAGSMIPYHRNLTSQGFRALIFSGDHDMCVPYTGSQAWTSSLGYKIVDEWRPWFSNAQSKLVYNPRKDSSSVDCLFVASSGRFPHSIIQPRIWSSSNPKSLFKDEFILPNSGNRSFLALFVGWSYRDLEFELEFIGGPYSSILGVPISRMGPCLSVGCKRAMAGSSVSSVLEARKLKDSENGLESKDSMFEQQSEEATVHRIPGRMFLNGSSEVASLYTQQGKKGMNQDAMIVWEHFGSRTDTFFCGVFDGHGPNGHLVAKRVRDSLPLKLTAHWEANASNEDISKEFGHKTGLNNENSGLETDWKEASSPLKHHEISENMKESFLKAFKRMDVELKMQPSIDCFCSGTTAVALVKQDRDLVIGNVGDSRAVLGTRDKDNCLQAVQLTIDLKPDIPAEAERILQCKGRVFAHEDEPEVARVWLPNNDSPGLAMARSFGDFCLKDFGLISVPEISYRFLTDEDEFIVLATDGIWDVLSNKEVVDIVASTPARSAAQSLVESATKAWRRKFPFSNIDDCAVVCLFLDSNLMVSDMNVKSQEDSSAVQAETAMVDDDVSGAAGLRCSEIVQTVGVST 968
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4987580 4996368 + Carg22721-RA Car11g00833 156786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00833 968 MobiDBLite consensus disorder prediction 685 699 - -
Car11g00833 968 MobiDBLite consensus disorder prediction 681 707 - -
Car11g00833 968 Pfam Protein phosphatase 2C 665 893 IPR001932 -
Car11g00833 968 ProSiteProfiles PPM-type phosphatase domain profile. 608 918 IPR001932 -
Car11g00833 968 Pfam Serine carboxypeptidase 38 457 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00441 Car-Chr1:2524632 Car11g00833 Car-Chr11:4987580 1.20E-163 dispersed
Car08g00065 Car-Chr8:384030 Car11g00833 Car-Chr11:4987580 3.65E-153 dispersed
Car11g00833 Car-Chr11:4987580 Car17g01237 Car-Chr17:9411555 0 dispersed
Car11g00833 Car-Chr11:4987580 Car05g00767 Car-Chr5:5959827 5.27E-164 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00833 K16296 - cmax:111498595 835.869