Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g00841 | ATGAGGCTTGAAGTGGAAGAAAACGATGTCGACGACGTTCTTCTTCCTCCTTCCAACTTCTCCATGGTTGAGGATGGCATTTTCCGATCCGGTTTCCCTCAGCCGGCTAATTTCCCCTTCCTCAAGAACCTCAACCTCCGCTCCATCATCTATCTGTGTCCAGAACCCTATCCAGAGGAGAATTTGGAGTTTCTTAGAGCCAATAACATCAAGCTTTTTCAATTCAAAATCGAAGGAAAAAAGGAGCCTTTCGTTTCAATGCCCAAGGATGCTATTCTGGATGCCCTAAAAATCCTAATTGGTATTGTGGATTTTGATGTTAGGAATCATCCCATTTTGATCCACTGCAAGCGTGGAAAGCATCGAACAGGCTCGCTGGTCGGTTGCCTGAGAAAGTTTCAGAACTGGTGCTTGACATCAGTGTTCGAGGAGTACCAGCGATTTGCAGGCATGAAGTCGAGGACGACGGACCTACAGTTCATCGAGACGTTCGACATCAGTTTGCTGAGGCAATGTGTTTACAGCATCATATACCAGTACCAAGGTTACAGCCAAAGCAAGAGGAGGCTGGTCTACCGAGAAGAAAATTTGCAGAAACCCCAACCAACATCAGTTTAG | 618 | 46.12 | MRLEVEENDVDDVLLPPSNFSMVEDGIFRSGFPQPANFPFLKNLNLRSIIYLCPEPYPEENLEFLRANNIKLFQFKIEGKKEPFVSMPKDAILDALKILIGIVDFDVRNHPILIHCKRGKHRTGSLVGCLRKFQNWCLTSVFEEYQRFAGMKSRTTDLQFIETFDISLLRQCVYSIIYQYQGYSQSKRRLVYREENLQKPQPTSV | 205 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5046967 | 5049145 | - | Carg22729-RA | Car11g00841 | 156794 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g00841 | 205 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 19 | 175 | IPR020422 | GO:0006470|GO:0008138 | |
Car11g00841 | 205 | Pfam | Tyrosine phosphatase family | 14 | 169 | IPR004861 | - | |
Car11g00841 | 205 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 114 | 124 | IPR016130 | GO:0016311|GO:0016791 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car02g00052 | Car-Chr2:359848 | Car11g00841 | Car-Chr11:5046967 | 2.63E-64 | dispersed | |
Car11g00841 | Car-Chr11:5046967 | Car11g01620 | Car-Chr11:12839350 | 1.71E-73 | dispersed | |
Car10g00750 | Car-Chr10:3963276 | Car11g00841 | Car-Chr11:5046967 | 6.57E-129 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g00841 | K18045 | - | csv:101211082 | 347.436 |