Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00841 ATGAGGCTTGAAGTGGAAGAAAACGATGTCGACGACGTTCTTCTTCCTCCTTCCAACTTCTCCATGGTTGAGGATGGCATTTTCCGATCCGGTTTCCCTCAGCCGGCTAATTTCCCCTTCCTCAAGAACCTCAACCTCCGCTCCATCATCTATCTGTGTCCAGAACCCTATCCAGAGGAGAATTTGGAGTTTCTTAGAGCCAATAACATCAAGCTTTTTCAATTCAAAATCGAAGGAAAAAAGGAGCCTTTCGTTTCAATGCCCAAGGATGCTATTCTGGATGCCCTAAAAATCCTAATTGGTATTGTGGATTTTGATGTTAGGAATCATCCCATTTTGATCCACTGCAAGCGTGGAAAGCATCGAACAGGCTCGCTGGTCGGTTGCCTGAGAAAGTTTCAGAACTGGTGCTTGACATCAGTGTTCGAGGAGTACCAGCGATTTGCAGGCATGAAGTCGAGGACGACGGACCTACAGTTCATCGAGACGTTCGACATCAGTTTGCTGAGGCAATGTGTTTACAGCATCATATACCAGTACCAAGGTTACAGCCAAAGCAAGAGGAGGCTGGTCTACCGAGAAGAAAATTTGCAGAAACCCCAACCAACATCAGTTTAG 618 46.12 MRLEVEENDVDDVLLPPSNFSMVEDGIFRSGFPQPANFPFLKNLNLRSIIYLCPEPYPEENLEFLRANNIKLFQFKIEGKKEPFVSMPKDAILDALKILIGIVDFDVRNHPILIHCKRGKHRTGSLVGCLRKFQNWCLTSVFEEYQRFAGMKSRTTDLQFIETFDISLLRQCVYSIIYQYQGYSQSKRRLVYREENLQKPQPTSV 205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5046967 5049145 - Carg22729-RA Car11g00841 156794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00841 205 ProSiteProfiles Dual specificity protein phosphatase domain profile. 19 175 IPR020422 GO:0006470|GO:0008138
Car11g00841 205 Pfam Tyrosine phosphatase family 14 169 IPR004861 -
Car11g00841 205 ProSitePatterns Tyrosine specific protein phosphatases active site. 114 124 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00052 Car-Chr2:359848 Car11g00841 Car-Chr11:5046967 2.63E-64 dispersed
Car11g00841 Car-Chr11:5046967 Car11g01620 Car-Chr11:12839350 1.71E-73 dispersed
Car10g00750 Car-Chr10:3963276 Car11g00841 Car-Chr11:5046967 6.57E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00841 K18045 - csv:101211082 347.436