Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00846 ATGGAAACAATTGATTCAATTACTGGTTTCTCTAATCTTCTTCAACCTCCAGATTTCTCTCAGTATGTTGAAATTGATCCGACTGGCAGATATGGAAGATATAATGAAATCCTCGGCAAAGGAGCTTCCAAGACAGTTTACCGAGCGTTTGATGAATATGAAGGGATTGAAGTTGCTTGGAACCAGGTCAAGCTCTGTAACTTCCTTCAATGCCCTGAAGATCTTGAGAGGCTATACTCTGAGATTCATCTTTTAAAAACATTGAAGCATAAGAACATTATGAAATTTTATACCTCATGGGTCGATACTGCAAATAGGAACATCAACTTTGTTACTGAAATGTTCACCTCTGGGACTTTGAGGCAATATCGGCTAAAACATAGGAGAGTTAACATTAGAGCAGTGAAGCGATGGTGCAGACAAATCTTGAGGGGTCTTCTCTATTTGCATAGCCAGAACCCCCCTGTGATCCACAGAGATCTCAAGTGCGATAACATTTTAGTTAATGGTAATCAAGGAGAAATTAAAATTGGAGATCTTGGTCTTGCTGCTATTCTCCGGAAATCGCATGCTGATCATTGCGTCGGGACACCAGAGTTCATGGCTCCTGAAGTATATGAAGAGGCTTATAATGAATTGGTAGACATTTATTCTTTTGGGATGTGTGTTTTGGAGATGGTTACATTTGAATATCCATATAGTGAATGTAATCATCCTGTTCAAATCTATAAGAAAGTTATTTCTGGCAAAAAACCAGATGCCTTATATAAAGTGAAGGATCCGAGCATGCGGCAATTTGTCGAGAAATGCTTGGCACCAGTCTCTTGTAGACCTTCAGCAAGGGAACTTTTGAGTGACCCTTTTCTCCAAATTAACGATTGTGAAAGCAAGTTACAACTTTCAGGATGTCCGAGAGAACTCGACGGTATTGCTTTTACTACAGCACACCCTTTCCTTGAACGACAAGGAAGTTTCAGCTCGATTAATTACCATTTGGAGGCCTCAGATGAATGGAGGTGTCGTTCGGTTCAGACTGAACCCGATGGGTTCGAACTTTTTGAGAATGATGATGATGATCAATTGGAAAACCTTGATAACAGTATTAAGGGGAAGATAAGAGAAGATGGCAGCATTGTTCTAAGACTTAGGATTGCAGATAAAGAAGGACGGATTCGAAACATTTACTTCCCGTTTGACACCAAGAATGATACAGCATTAACGGTTGCTACTGAAATGATAGCAGAACTTGATATTACCGACCAAGATGTGATCAAGATAGCTGAAAAAATTGATGGGGAAATTGCTTCCTTGGTACCTGAGTGGAAGTCGGGGCCTGGAATAGACGAAACACCTCGTATCTCTTACGATGGTGGCTGTCAAAGCCACGACGCTGCTAACCATTCATGTGATCATAGTTTGATAGGGAATAACCAAAATGGAGAAAAACTCTATCAGATTTTAAACTTAAGCACAGTTGAACGTGCTTCGGTGCACGAACTTTTCAAGCAGGACTCCCTCAAAGCTGATCGGCCTCCAGAACCTGTGGTAGAGAGTCCACCAAAAGTGTCAAGCCAGCATTATCAGCCAAACTCAGTCCTCCTTGAAGATCCAGCTCTTGGTTCTCATAGTTTTAGGCATAGCCATTCTAATCAAAATTTCAAGAAAATAGGCCAGTCGATCATTGTTGGGGATGACAAAGAAAAAATACTAGATAAAAATGCCATTGCAAGAACTTCACTCAGAAGCTTGCTGGGTTCCCGATCGCTGTCTACAGTTCCGTCCTATCGTGAAGATAAATTTGCATCCCAAATTCATCGAGAAATTAGATGGCTATGGAATTGA 1842 40.83 METIDSITGFSNLLQPPDFSQYVEIDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLCNFLQCPEDLERLYSEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHRRVNIRAVKRWCRQILRGLLYLHSQNPPVIHRDLKCDNILVNGNQGEIKIGDLGLAAILRKSHADHCVGTPEFMAPEVYEEAYNELVDIYSFGMCVLEMVTFEYPYSECNHPVQIYKKVISGKKPDALYKVKDPSMRQFVEKCLAPVSCRPSARELLSDPFLQINDCESKLQLSGCPRELDGIAFTTAHPFLERQGSFSSINYHLEASDEWRCRSVQTEPDGFELFENDDDDQLENLDNSIKGKIREDGSIVLRLRIADKEGRIRNIYFPFDTKNDTALTVATEMIAELDITDQDVIKIAEKIDGEIASLVPEWKSGPGIDETPRISYDGGCQSHDAANHSCDHSLIGNNQNGEKLYQILNLSTVERASVHELFKQDSLKADRPPEPVVESPPKVSSQHYQPNSVLLEDPALGSHSFRHSHSNQNFKKIGQSIIVGDDKEKILDKNAIARTSLRSLLGSRSLSTVPSYREDKFASQIHREIRWLWN 613
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5156074 5159419 - Carg27950-RA Car11g00846 156799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00846 613 MobiDBLite consensus disorder prediction 503 527 - -
Car11g00846 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Car11g00846 613 Pfam Protein kinase domain 35 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00846 613 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 433 IPR024678 GO:0004674|GO:0005524
Car11g00846 613 ProSiteProfiles Protein kinase domain profile. 32 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00846 Car-Chr11:5156074 Car17g00216 Car-Chr17:1308498 0 dispersed
Car11g00846 Car-Chr11:5156074 Car12g01079 Car-Chr12:10561342 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89183 PF00069 Pkinase 1.40E-49 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00846 K08867 - csv:101222641 988.408