Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00860 ATGGCCGTAGAGAACCCCGATTGGAGGTCCATCAATGAAGAAGCCTTCATCCCCTTCGGAATCGAATACCCTCATCCTCAACAATCCTTCTTCCACCACCGATTTCACCAACTTTACCCGCCCGAGTTCTACCAAAAGGTTGTGGCAGAGCTGATTGCTACGTATTTGCTTGTGTTTGTGACATGCGGGACGGCGGCATTGAGTGTCCATGATGAGCGGCAACTGCCCAAGCTTGGCGCGTCCATTGCGGGCGGCCTTATTGTCATGGTCATGATTTACGCTGTCGGACATATCTCCGGCGCTCATATGAATCCCGCGGTTACTTATACTTTTGCTTCTCTTAGGCGATTTCCTTGGAAACAGGTTCCACTCTATGTAGCTGGTCAACTAAGTGGTGCTACATCGGCAGCTTTTACCCTGCGCATATTATTGGACCCAATTAAAGAAATAGGCACTACTACACCTTCTGGTTCCGACCTAAAAGCACTTCTCATGGAGATTGTTGTCTCATTCTGTATGATGTTCGTCACTTTTGCGGTTGCCACCGACACAAAAGCAAGAGGAGAGGTTGCAGGTATAGCAGTCGGTTCAGCTGTTTGTATCACATCCATCTTTGCAGGGTCTATATCGGGTGGATCGATGAACCCTGCGAGGACAATTGGACCTGCCATTGCAAGTTCACATTATGAAGGAGTTTGGGTGTATCTGGTCGGGCCAATTATAGGGACGTTATTGGGAGCATGGTCATATAATTTCATACAGAGTGAGTGA 771 48.12 MAVENPDWRSINEEAFIPFGIEYPHPQQSFFHHRFHQLYPPEFYQKVVAELIATYLLVFVTCGTAALSVHDERQLPKLGASIAGGLIVMVMIYAVGHISGAHMNPAVTYTFASLRRFPWKQVPLYVAGQLSGATSAAFTLRILLDPIKEIGTTTPSGSDLKALLMEIVVSFCMMFVTFAVATDTKARGEVAGIAVGSAVCITSIFAGSISGGSMNPARTIGPAIASSHYEGVWVYLVGPIIGTLLGAWSYNFIQSE 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5317019 5319274 + Carg22892-RA Car11g00860 156813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00860 256 Pfam Major intrinsic protein 41 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00860 Car-Chr11:5317019 Car14g00533 Car-Chr14:2914833 3.62E-80 dispersed
Car11g00859 Car-Chr11:5293933 Car11g00860 Car-Chr11:5317019 9.07E-122 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00860 K09874 - csv:101205456 360.533