Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00885 ATGTTCGATTGTGGTGGATACAAGTCGCAGTACATAGGTGGTCACAAGGAGAAATTCGTGAGGTTGGATGAGTTGGATTCAAATTTGTCAGCATCCTCTGAATCAAGCAAGATGAAGAAATGCCGATTCAACCTAGAAAGCCTCCCACTGCCATTCATTAGCCGATCGAATCCTCGAAACGCGTCGCAATCGTTCCGTAGGGGAGTACAAATGAGCTCTGACGGAATTCTAACCCTAGGCCGCTCGCTCCACTCTAGCGTGTCCAAAGTCATTTTCCCTGAGGACCTGAAAGTGTCAGAGCAGAAAATCTTCGATCCGCAGGACAAATCGCTTCTCTTCTGGAACAAGCTATTCGTCCTGTGCTGTATTCTCGCCGTCTCCATCGATCCTCTGTTCTTCTACCTCCCTGTGTTCAACCACGCCTCTTACTGCCTCGGAATGGACACTCAGCTTGCCGTCACGACCACCACCGCCCGTACGGCCGTCGACCTGTTCTACTTGATTCGGATGGCGTTCCAGTTCCGGACGGCTTACATTGCGCCATCGTCAAGGGTGTTTGGCCGCGGCGAACTTGTGATCGATCCGGCAGAGATCGCCAAGCGGTATCTTCAGCGCTATTTCATTGCCGATTTCCTCGCTGTTCTTCCTTTTCCTCAGGTTGTGGTGTGGAGATTTCTTCACAGGTCAAAAGGTTCAGAGGTGTTGGCAACAAAACAAGCATTGTTAAACATAGTGTTTCTTCAGTACATTCCCAGATTTGTTAGGTTTATACCTTTGAACATAGAACTTAAGAAGACCGCAGGTGTTTTTGCTGAAAGCGCCTGGGCTGGTGCTGCTTACTATCTCCTCTTGTACATGCTCGCCAGTCATATAGCGGGAGCGTTCTGGTACTTGCTGGCAGTGGAGAGGAACGACGCATGTTGGAGACAAGCGTGCAGAAGCAGTGGGAAGTGCAACATAAACTTCCTGTACTGCGGAAATAAGCACATGCCTGGGTATAAGGAGTGGAAAGTTATTAGTGTTGGTATTCTCAGAAGGAAATGCACAGCCATTGGAGATAATTTGCCATTCAACTATGGCATTTACACACAGGCTATTGCCTCTGGCATTGTTCAGTCCAGGACTTTCTTCTCCAAGTTCTGCTACTGCTTGTGGTGGGGCTTGCAAAATTTGAGTACGCTTGGCCAGGGACTGCTCACCAGTACCTATCCAGGGGAGGTTATCTTTTCCATACTAATTGCAATTTCTGGGCTCATCCTTTTTGCACTCTTGATTGGAAACATGCAAACGTACCTTCAATCTCTAACCGTTCGCCTTGAGGAGATGCGCATCAAAAGGCGAGACTCGGAGCAGTGGATGCACCATCGGTTGCTTCCCCCGGACTTGAGAGAAAAAGTTAGGCGATATGATCAATACAAATGGCTTGAAACTAGAGGAGTGGATGAAGAGAGCTTGGTTCAAAGTCTTCCAAAGGACCTTAGGAGAGACATTAAACGCCATCTCTGTCTCAATTTGGTTAGAAGG 1524 48.16 MFDCGGYKSQYIGGHKEKFVRLDELDSNLSASSESSKMKKCRFNLESLPLPFISRSNPRNASQSFRRGVQMSSDGILTLGRSLHSSVSKVIFPEDLKVSEQKIFDPQDKSLLFWNKLFVLCCILAVSIDPLFFYLPVFNHASYCLGMDTQLAVTTTTARTAVDLFYLIRMAFQFRTAYIAPSSRVFGRGELVIDPAEIAKRYLQRYFIADFLAVLPFPQVVVWRFLHRSKGSEVLATKQALLNIVFLQYIPRFVRFIPLNIELKKTAGVFAESAWAGAAYYLLLYMLASHIAGAFWYLLAVERNDACWRQACRSSGKCNINFLYCGNKHMPGYKEWKVISVGILRRKCTAIGDNLPFNYGIYTQAIASGIVQSRTFFSKFCYCLWWGLQNLSTLGQGLLTSTYPGEVIFSILIAISGLILFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRLLPPDLREKVRRYDQYKWLETRGVDEESLVQSLPKDLRRDIKRHLCLNLVRR 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5508120 5511661 - Carg22917-RA Car11g00885 156838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00885 508 Pfam Ion transport protein 113 438 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00919 Car-Chr2:6515664 Car11g00885 Car-Chr11:5508120 2.50E-40 dispersed
Car11g00885 Car-Chr11:5508120 Car12g00767 Car-Chr12:7356547 0 dispersed
Car11g00885 Car-Chr11:5508120 Car05g00917 Car-Chr5:8888888 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00885 K05391 - csv:101221166 915.22