Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00917 ATGCTGAGAGATTATTTCAATCGCATCTATGTTGGATTTCTGATGCAACTACTGACTGAAATTATTTTGATTTATTGGCTTCTCAGATTTGATTTGATCTATTTAATTCTGGATAAGGCTGATGAGCAAACAGATAGGCGCCTTGCTAAGCATATTGTCTCACTACACTTCGACAACCCAGAGGGTATTGAGCAGGATTTCTTGGACCTTCATACCTTGACTTCATATGTCAGCTATGCTAGGAAAAATATTCACCCGAAATTGTCAGATGAGGCAGCTGAAGAGTTGACTAGAGGCTATGTTGAACTGAGGAGGAGAGGAAACTTTCCAGGCAGTAGTAAAAAGGTTATAACAGCTACTCCCCGGCAGATCGAGAGTTTAATACGTCTAAGCGAAGCCCTTGCTCGAATACGTTTCTCAGAATGGGTTGAAAAGGGCGATGTCCTTGAGGCTTTCCGCCTTCTCGAAGTCGCAATGCAACAGTCTGCAACAGATCATTCTACAGGAACCATTGACATGGATCTGATCACCACGGGAGTATCGGCAAGCGAAAGGATGCGAAGGGAGACTATATTATCGGCAACTCGCAACATTATTATGGAGAAAATGCAGCTCGGAGGACCCTCCATGCGCCTGACAGAGTTACTGGATGAGCTGAAGAAACAGAATCCTGATAATGAAGTCCACCTCAACAATCTTAGGAATGCGGCGTCGACGCTTGCAAGTGAAGGATTTGTAGCAATCCATGGTGATAGCATAAAGAGAATATGA 771 43.71 MLRDYFNRIYVGFLMQLLTEIILIYWLLRFDLIYLILDKADEQTDRRLAKHIVSLHFDNPEGIEQDFLDLHTLTSYVSYARKNIHPKLSDEAAEELTRGYVELRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSEWVEKGDVLEAFRLLEVAMQQSATDHSTGTIDMDLITTGVSASERMRRETILSATRNIIMEKMQLGGPSMRLTELLDELKKQNPDNEVHLNNLRNAASTLASEGFVAIHGDSIKRI 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5811207 5812926 + Carg24674-RA Car11g00917 156870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00917 256 Coils Coil 216 236 - -
Car11g00917 256 Pfam MCM P-loop domain 27 56 IPR001208 GO:0003677|GO:0005524|GO:0032508
Car11g00917 256 Pfam MCM AAA-lid domain 72 158 IPR041562 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00917 Car-Chr11:5811207 Car07g00005 Car-Chr7:45880 8.21E-19 dispersed
Car11g00917 Car-Chr11:5811207 Car19g00528 Car-Chr19:6875084 7.97E-20 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00917 K02212 - csv:101211850 423.705