Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00918 ATGCCGATAACTCTTGGTTCTTCTATAACTCCTGACCACCCAATGTATTACTTCTTCCAGCTCAATGTTGAGAAAAGCCCGTTCCAGCGTACTTATGCTGCACAGATCAAAAGATGTGGAGAGATGGCACGCAAATTGCATTTTTTCAAGGAACAGATGTTGAAGGCTGGATTGTCAAGCAAAAGTTCTGTGTCACAAGTTGATATCAGTATAGATGACCTTGAGGTTAAACTTGGTGAGCTTGAGGCAGAACTGGTTGAGATAAATGCTAATAGTGAGAAGCTACAGCGTTCCTACAATGAACTTGTGGAGTACAAGCTTGTTCTGCAGAAGGCTGGTGAGTTTTTCAGTTCAGCGCAAAGCAGTGCCGTAGAGCAGCAAAGAGAATTTGAATCTAGGCGAGTTGGTGGAGATTCAATAGAAGTTCCATTGTTGTTGGAACAAGAATCATCTGCGGATCAGTCAAAGCCAGTTAATTTGGGATTTCTCTCTGGTCTTGTTCCTCGGGAAAAGTCTATGGCATTTGAGAGGATACTATTTCGTGCAACCAGGGGCAATGTGTTTCTGAAGCAGGCTGCAGTTGACGATCCTGTTCCAGATCCTATTTCTGGAGAGAAGGTTGAGAAAAACGTGTTTGTTGTTTTTTACTCTGGAGAAAGAGCGAAGAATAAGATTCTAAAAATATGTGAGGCATTTGGTGCAAACCGTTACCCTTTTACCGAGGACTTGGGGAAACAAGCCCAAATGATCGCTGAGGTTTCTGGAAAACTGGCTGAGCTGAAGACTACAATAGATGTAGGGCTGCTGCACCGGGGTAATCTGTTGAAGAATATTGGAGAACATTTTGAAAATTGGAATATCATGGCGAGGAAGGAAAAGTCCATATACCATATCTTGAACATGCTTAGCCTTGATGTAACCAAAAAATGTTTGGTCGCCGAGGGATGGGGTCCTGTTTTTGCAACAAAACAGATTCAAGATGCACTCCAGCGAGCAGCAACTGACTCCAACTCCCAAGTTGGACCAATTTTCCAGGTTTTATTAACTACGGAAGCACCACCTACTTATTTTCGGACAAACAAATTCTCCACTGCCTTTCAAGAAATTGTCGATGCCTATGGGGTAGCAAAGTATCAAGAAGCCAATCCTGGTGTATACACCATTGTCACGTTTCCATTTCTGTTTGCTGTTATGTTTGGTGATTGGGGGCATGGAATATGTCTGTTACTTGCAACACTCTATTTTATATTACGGGAAAAAAAACTTTCTTCTCAGAAGCTTGGCGATATCACTGAAATGGCCTTTGGTGGACGCTATGTCATTTTGATGATGTCACTATTTTCGATATACACGGGTCTGATCTATAATGAGTTCTTCTCAGTCCCATTTGGACTATTTGGTCGCTCAGCATATGAATGCCGTAGTCCTGATTGCAGCGATTCTACCACTGTGGGGTTGATAAAGGCGGGTTCTACATATCCATTTGGCTTGGATCCTGTATGGCATGGCACTCGAAGTGAGCTTCCATTTCTCAACTCTCTGAAAATGAAAATGTCAATTCTCCTTGGAGTTGCACAAATGAATCTTGGAATTATAATAAGCTATTTCAATGCTACATTTTTCCGGAACAGCATCAATATCTGGTTCCAATTCCTGCCACAGATGATATTTCTGAACAGCCTTTTCGGTTATCTTTCTCTTCTGATCATCATAAAGTGGTGCACTGGTTCAAAAGCTGATCTGTACCACGTAATGATATATATGTTTTTAGGCCCAACTGAAGATCTGGCTGAAAATCAGCTTTTTCCTGGGCAGAAAAATGTTCAGATTGTGCTCCTCTTACTCGCTCTTATTGCCGTGCCATGGATGCTGCTTCCAAAGCCTTTTCTTTTGAAGAAACAGCACGAACAGAGGTTCCAAGGCCAGTCTTATGCGCCACTTCCAAGTGCTGATGATTCCCTTGAGTTGGACTCGCATCATGATTCACATGGTCATGAGGAGTTCGAGTTCAGTGAGGTTTTTGTGCATCAGCTTATACATACCATTGAATTTGTGCTTGGAGCAGTGTCAAATACAGCCTCCTATCTTCGTCTATGGGCTTTAAGTCTTGCACACTCGGAGTTGTCAAGTGTGTTCTATGACAAGGTTCTCGTTCTATCTGCAGGGTTCAACAACGTTATAATCTTAATAGTAGGCATTATCGTTTTTATTTTTGCTACCGTGGGTGTGTTGCTATTGATGGAGACTCTAAGTGCCTTCCTTCATGCACTGCGTCTTCATTGGGTCGAGTTTCAAAACAAGTTCTACGAGGGAGACGGTTACAAATTCAATCCTTTCTCATTTGCATTGCTTGACGAAGATGATGAATAA 2370 42.19 MPITLGSSITPDHPMYYFFQLNVEKSPFQRTYAAQIKRCGEMARKLHFFKEQMLKAGLSSKSSVSQVDISIDDLEVKLGELEAELVEINANSEKLQRSYNELVEYKLVLQKAGEFFSSAQSSAVEQQREFESRRVGGDSIEVPLLLEQESSADQSKPVNLGFLSGLVPREKSMAFERILFRATRGNVFLKQAAVDDPVPDPISGEKVEKNVFVVFYSGERAKNKILKICEAFGANRYPFTEDLGKQAQMIAEVSGKLAELKTTIDVGLLHRGNLLKNIGEHFENWNIMARKEKSIYHILNMLSLDVTKKCLVAEGWGPVFATKQIQDALQRAATDSNSQVGPIFQVLLTTEAPPTYFRTNKFSTAFQEIVDAYGVAKYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLATLYFILREKKLSSQKLGDITEMAFGGRYVILMMSLFSIYTGLIYNEFFSVPFGLFGRSAYECRSPDCSDSTTVGLIKAGSTYPFGLDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIISYFNATFFRNSINIWFQFLPQMIFLNSLFGYLSLLIIIKWCTGSKADLYHVMIYMFLGPTEDLAENQLFPGQKNVQIVLLLLALIAVPWMLLPKPFLLKKQHEQRFQGQSYAPLPSADDSLELDSHHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLVLSAGFNNVIILIVGIIVFIFATVGVLLLMETLSAFLHALRLHWVEFQNKFYEGDGYKFNPFSFALLDEDDE 789
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5815382 5829072 + Carg24675-RA Car11g00918 156871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00918 789 Pfam V-type ATPase 116kDa subunit family 18 781 IPR002490 GO:0033179|GO:0046961|GO:1902600
Car11g00918 789 Coils Coil 64 98 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00228 Car-Chr5:1215524 Car11g00918 Car-Chr11:5815382 5.95E-07 dispersed
Car05g00230 Car-Chr5:1217410 Car11g00918 Car-Chr11:5815382 2.36E-24 dispersed
Car11g00918 Car-Chr11:5815382 Car12g00408 Car-Chr12:2605249 0 dispersed
Car11g00918 Car-Chr11:5815382 Car19g00527 Car-Chr19:6865119 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00918 K02154 - csv:101211364 1403.65