Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00931 TTCCGTCACCCAGAAATCTCTCAACTTCCGTTCTTCTCCAAATCATTTCCTGCAAAATTTCTCATTATCACAGAAAAACCCACCAACAATATCTTCTTTCTCTGTTTGTTTCCGTTTCTTCTCCTTTCGCCGGAAACAATGGCGGTTTCCGGTAGCAATTCGACGGAGATTCACCCCGCTGACGAATCTTCCTCCAGTTCTTCTACAACTTCTCTATCTAACTTGAAAATCTATGCTGCAATCGGTGTAATCGTTGCGTGTGTGATTGCGGCTTGTGCTTTGATCTTCCTCTGTTTCCGCAGAAATCGGGACTCGAGGAAGCACAAAATGCGGGTGAAGCACAGCTCCGGATTGATTCCTTTGGTCTCCAAGGAGATAGCCGAGATCAAAGAGTCCGATCCGACTGCGGATTGCGAGAAAGGGGAAGTGGTTAGGGTTGAGAAAAAGATGGAGATCGAGTTCGAAAGTGGAGTAGGTAAAAAGAGTCAAGAGAGCGACGTATCCGGAGGCGGTCGGAGCGACATGTCGGTGGAGGATCAGAACTTAGGATGGGGACGGTGGTACAGCTTGAAGGAACTGGAAATGGCCACCGATGGATTTCTGGAAGAGAATGTGATCGGAGAAGGAGGGTACGGTATCGTGTACAGAGGAGTTTCGCCGGACGGCTCCGTCGTCGCCGTGAAGAGTCTTCTTAACAATAAGGGTCAGGCAGAGAAAGAGTTCAAGGTTGAAGTAGAGGCCATTGGAAAAGTAAGGCACAAGAACTTGGTGGGTCTGATAGGTTTCTGTGCAGAAGGAGCACAGAGGATGCTCGTGTTTGAATATATTGATAATGGCAACTTGGAGCAATGGCTACATGGTGATGTGGGGCCTGTTAGCCCTCTAACATGGGATATTAGGATGAAGATTGCTCTTGGGACAGCAAAAGGCTTGGCCTATTTGCATGAAGGTTTAGAACCTAAAGTCGTGCACCGTGATGTAAAATCCAGCAACATTCTTTTAGATAGAAAATGGAATGCAAAGGTGTCCGATTTTGGACTTGCAAAACTCTTACAACCCGAAGCCACCTACGTAACTACTCGAGTAATGGGGACGTTCGGATATGTGTCCCCTGAGTATGCAAGTACAGGCATGCTAAACGAGGGAAGCGACGTATACAGTTTCGGGGTTCTACTTATGGAGATCATTACCGGTCGAAGCCCAATCGACTATTCCAGGCCCCCAGGAGAGATGAACTTGGTGGACTGGTTTAAAGGAATGGTGGCGAATCGACGTGGCGAAGAGGTTGTGGATCCATTGATTGAGATTCCACCCTCTCCAAGAGCTCTAAAGCGACTGTTGCTTGTTTGTCTACGCTGCATTGACTTGGATGCCAATAAAAGGCCAAAGATGGGGCAAATCGTTCACATGCTAGAGGCAGATGACTTTCCTTATCGTTCGGTAAGCGCTGTTGTTCACCATGCTCTTTGA 1470 47.55 FRHPEISQLPFFSKSFPAKFLIITEKPTNNIFFLCLFPFLLLSPETMAVSGSNSTEIHPADESSSSSSTTSLSNLKIYAAIGVIVACVIAACALIFLCFRRNRDSRKHKMRVKHSSGLIPLVSKEIAEIKESDPTADCEKGEVVRVEKKMEIEFESGVGKKSQESDVSGGGRSDMSVEDQNLGWGRWYSLKELEMATDGFLEENVIGEGGYGIVYRGVSPDGSVVAVKSLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLIGFCAEGAQRMLVFEYIDNGNLEQWLHGDVGPVSPLTWDIRMKIALGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRKWNAKVSDFGLAKLLQPEATYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLVDWFKGMVANRRGEEVVDPLIEIPPSPRALKRLLLVCLRCIDLDANKRPKMGQIVHMLEADDFPYRSVSAVVHHAL 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5941496 5944835 + Carg24688-RA Car11g00931 156884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00931 489 Pfam Protein kinase domain 202 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g00931 489 ProSitePatterns Protein kinases ATP-binding region signature. 206 228 IPR017441 GO:0005524
Car11g00931 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 322 334 IPR008271 GO:0004672|GO:0006468
Car11g00931 489 ProSiteProfiles Protein kinase domain profile. 200 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00931 Car-Chr11:5941496 Car11g01646 Car-Chr11:12954273 2.32E-151 dispersed
Car11g00931 Car-Chr11:5941496 Car19g00506 Car-Chr19:6726105 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89184 PF00069 Pkinase 6.00E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00931 - - cpep:111792269 891.723