Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00952 ATGGGTTGTGTTGTGAAGTGCGTTTTCATGATTGTGATTGCTAATTCACTGTTGAATGCAGCAGAGAGCTTCAATGTAGAAGAGCTTGAGAGAGTTTCAGGGGAAGATGAGAGTGGAGGAAATAGACCTTTAATTCTGGAGAGATTCAGAGCTCTACTTGGACTCAATCAAAGCCCATCAGATCTGTCGCCTTCGCCGTCTCCATCACCAGCCGAGGCAGCTCGTCCAGTGCACACCCATAAACATTCCCGCCCTCATCAGCTTCGCTTGCACAAGAGCCGACCAGTCTACAAATCTAAAAGACATGAAGATGCAAGAAAAAGAGTCAGAAAAATTCTTGTTGCAGTTCTTGTGTCTACAGGAATCACCATTTTGATATGCATTATTGCTGCCTTCTGGGTCTGCAAGAAGTTTAAAATTCGAACAGAGGAACCCGCGGAGAAGCTTTCTATAACGAGTGAAACAGGAGAGAAGACAGCCAAACAAAAATCTGGGTTTGATCTGTTCGATCTCAGTACGCATGGAATGGATGTTGAAGAACACAGTGTTTCCTCATCTGGGGAGAGAGTTACTCCTGTTAAATCTTGTTCTTCTGATGAGGAGGAATCATTCCATTCTTGTGGGGATACCAATTTGTCGAATGTTCGTCTTTCAAATGCTTCTGAATCTTCTTCAGCTAATGTGAAAACAAATTCTTATTCTTCAGAACCTAACAAACCATTAACTTCTGACCAGTTTCATCTGACCCCTTCTCCTTGTAACTCAGAAACCAAGGATGTCCCATCTTTAGCTCCGCCTCCACCACCACCGCCGCCGCCGCCGCTGCGGCCATCTCCGGTTACTTATCGCAGTTCATTTTCCCTCTCTTCACCCTTTTCAACTGGATCCACCTCCTCTTCTGCATTGCTAAGATCATCATCTCCTGCAATGTCAGATTCTTCTTCGTTATCTCAAATACCATGGAATGATCTGCCATCACCTCCAAACATTGCTAAACCTTCACTACCATCATCTACTATTCCTCCACCCCCTTGTCCACCGCCAAGTTTGAAAGAAAACGCTTGTTCTTTCAAAGCCCCACCTCCTCCTCCTCCTTCCAAACTCCCTCAATTCATGGCATTTGGAAAAGAGGGAAATCTGCTGCCGAAACTTAAGCCTCTCCACTGGGACAAAGTAAGAGCTGCACCAGATCGATCGATGGTGTGGGACAAGCTAAGATGGAGTTCATTTGAGCTAGATGAAGAAATGATTGAGTCACTATTCGGCTACAACCAACATGGTTCAATGAAGAATGGTGATGCTAGCAACAAAACCCCTTCTCCAAGCAAGCATATCCTAGAGGCTAAGAGACTTCAGAACCTAACCATACTCTTAAAAGCCCTGAATCTCTCAGCAGAACAAGCTTGTGAAGCCATAGAACAAGGGACTGGGTTGCGTTTAAGACAACTTGAAGCACTGGTAAAGATGGTACCAACACAGGAAGAACAGGCCAAATTGTTAAGCTATGAAGGAGACATCGGTGAATACGGGTGCACAGAGAAGTTTGTGATAGCAATTCTGAGAATACCATTCGCCTTCCAACGAGTAGAAGCCATGCTCTACAGAGAAACTTTTGAAGATGAAGTGAATCATCTCCGGAATTCGTTTTCAATGCTAGAGGAGGCTTGCAAGGAGCTAAGATCCAGCAGGCTTTTCCTGAAACTACTTGAAGCCGTGCTCAAAACAGGGAACCGAATGAACGTGGGAACAAGCAGAGGAGGCGCAAAAGCATTCAAACTAGACGCACTCCTAAGACTCTCCGACGTCAAAGGAACCGACGGAAAAACCTCCCTCCTCCATTTCGTGGTCCAAGAAATAATCCGATCAGAAGGAATCCGAGTCTCCGGTAGCATAATGGGGAAAATCAGCCAAAAGAACAAATCGAGAACAATCGAAGAAAGAGAAAACGAATACCGAAGAATGGGATTAGATCTGGTCTCCGGCCTGAGCACCGAATTACACAACGTTAAGCGAGCGGCGACAACCGATCTGAAAGTTCTGGCGAGCGCCACAGCGAATCTGAACGAGGGAATGGCGAGATTGCAAGAACTAGTGTTGAAGGAACTGTGTGGAGATGAAAGGAGTGGGAACTTCGTGAGCGCAATGAAAGGGTTCTTGAGCTACGTGAAGAAGACGATGGAGTTGGTGAGGAAGGACGAGGAAGGGGTGATGGGGAGCGTGAGAGAGATCACAGAGTACTTCCATGGAAATGTGAGCAAAGAAGAGACGAATCCGCTGAGGATTTTTGTGATTGTGAGAGATTTTTTGGGAATGTTGGACAATGTGTGTAAAAGCTTCAAGATCGGAAGTTGA 2352 45.62 MGCVVKCVFMIVIANSLLNAAESFNVEELERVSGEDESGGNRPLILERFRALLGLNQSPSDLSPSPSPSPAEAARPVHTHKHSRPHQLRLHKSRPVYKSKRHEDARKRVRKILVAVLVSTGITILICIIAAFWVCKKFKIRTEEPAEKLSITSETGEKTAKQKSGFDLFDLSTHGMDVEEHSVSSSGERVTPVKSCSSDEEESFHSCGDTNLSNVRLSNASESSSANVKTNSYSSEPNKPLTSDQFHLTPSPCNSETKDVPSLAPPPPPPPPPPLRPSPVTYRSSFSLSSPFSTGSTSSSALLRSSSPAMSDSSSLSQIPWNDLPSPPNIAKPSLPSSTIPPPPCPPPSLKENACSFKAPPPPPPSKLPQFMAFGKEGNLLPKLKPLHWDKVRAAPDRSMVWDKLRWSSFELDEEMIESLFGYNQHGSMKNGDASNKTPSPSKHILEAKRLQNLTILLKALNLSAEQACEAIEQGTGLRLRQLEALVKMVPTQEEQAKLLSYEGDIGEYGCTEKFVIAILRIPFAFQRVEAMLYRETFEDEVNHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTSRGGAKAFKLDALLRLSDVKGTDGKTSLLHFVVQEIIRSEGIRVSGSIMGKISQKNKSRTIEERENEYRRMGLDLVSGLSTELHNVKRAATTDLKVLASATANLNEGMARLQELVLKELCGDERSGNFVSAMKGFLSYVKKTMELVRKDEEGVMGSVREITEYFHGNVSKEETNPLRIFVIVRDFLGMLDNVCKSFKIGS 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6191174 6194103 - Carg25032-RA Car11g00952 156905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00952 783 MobiDBLite consensus disorder prediction 178 367 - -
Car11g00952 783 Pfam Formin Homology 2 Domain 382 772 IPR015425 -
Car11g00952 783 MobiDBLite consensus disorder prediction 326 350 - -
Car11g00952 783 MobiDBLite consensus disorder prediction 58 102 - -
Car11g00952 783 MobiDBLite consensus disorder prediction 261 279 - -
Car11g00952 783 MobiDBLite consensus disorder prediction 280 324 - -
Car11g00952 783 ProSiteProfiles Formin homology-2 (FH2) domain profile. 374 783 IPR015425 -
Car11g00952 783 Coils Coil 535 555 - -
Car11g00952 783 MobiDBLite consensus disorder prediction 79 96 - -
Car11g00952 783 MobiDBLite consensus disorder prediction 207 258 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g00964 Car11g00952 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00952 Car-Chr11:6191174 Car19g00146 Car-Chr19:1276446 2.42E-118 dispersed
Car10g00964 Car-Chr10:9110351 Car11g00952 Car-Chr11:6191174 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00952 - - cmos:111441137 1428.69