Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00965 ATGGGGGCTAAATTTTCAAAGCCGAGTCAGGCGAAGGACTCGGCGAAGGTGGAAAACCTTAGTCTGCAACACCATCTCATCAATTATCTATCAAAAAGCTTTTACATCCGTAACTTGGTTTCCAAGCAAAGGAGGCGCATGCTTGTCGCCGGCTATGATCTTGACATGTCATACATCACAGATCATGTTCTGGCAATGTCATTCCCTGCCGAACGTATGCGTGCAATGTATCGTAACCCCCTATGGCAGGTAAAGTCCGTATTGGACATGAGGCATCAAGGACACTACAAGATCTATAATCTTTGCATTGAAGAATCATATGATCCATCACATTTTCATGGGCGTGTGGAGTCATTTCCTTTCGATGATAATCATGTTCCACCTCTACAGATGATCAAACTTTTCTGTGAAAATGTCTCTTCATGGCTATCATTCCACCCAAAGAATATTGCAGTTATACATTGCATGGCTGGAAAAGGTCGAACTGGATTGATGGTATGTGCCTACTTGGTTTACTGTGGCATGTCACCAGAGGATGCACTTCAGCTGTATGCTCAGAGGCGGACAACCAATAATGAAGGAGTATCAATTCCAAGCCAACGACGGTACGTGGGCTACTGGGCAAAGTGTCTTTCCTTTCCCAAGGGAGTTTATAATGGACCACCTGAGGTGAAGTTGCCCGAACCGTGTAGGAGAGAGTTGCAGAGAATTCGTCTTTATGACACAGTTAACACTGAATCAATTTTCTTTGTTGTCTCAGAATTGCAGGAGATTCCTTCTCAGCTGTACCGTCCATCTATGGAACTTACCAGGAATCGTTGCAGACAATTCAAGAAAGGTTATGAGAGAAATGACAGTCCTCGTTACTTTTTATCTTTTGTTGAAGCCAAAAACAAAGGGAATGAACCAGAACTCGAACCGCACCTTGTTGTTCAAATGGACACCGAGTGTTCTGCACTGTACCACAAAACCTGCCTTGACTACAATTTTGAGAAGCCTCTACCACTAACTGGAGATGTGCGCATCATATTCTACGCAAAGATGTTCGGAGGGCGTCTCTTCTATGCTTGCTTCAACACAGCTTTCATTAAAAACAGCTTGCTACAGCTGAGGTTGCCGGATTTGGACAAAGTTGGGAAAAAGGGAATGTCAATTTGTGGTCCTTCCTTCTGCTTGGAGTTGGTATTTGGTCCTGCGAATGCAAAACACTCATTTTTTACTTCATCAGATGACGAAAATGCTAGTGATGATATGTCTTAA 1260 43.41 MGAKFSKPSQAKDSAKVENLSLQHHLINYLSKSFYIRNLVSKQRRRMLVAGYDLDMSYITDHVLAMSFPAERMRAMYRNPLWQVKSVLDMRHQGHYKIYNLCIEESYDPSHFHGRVESFPFDDNHVPPLQMIKLFCENVSSWLSFHPKNIAVIHCMAGKGRTGLMVCAYLVYCGMSPEDALQLYAQRRTTNNEGVSIPSQRRYVGYWAKCLSFPKGVYNGPPEVKLPEPCRRELQRIRLYDTVNTESIFFVVSELQEIPSQLYRPSMELTRNRCRQFKKGYERNDSPRYFLSFVEAKNKGNEPELEPHLVVQMDTECSALYHKTCLDYNFEKPLPLTGDVRIIFYAKMFGGRLFYACFNTAFIKNSLLQLRLPDLDKVGKKGMSICGPSFCLELVFGPANAKHSFFTSSDDENASDDMS 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6360529 6364332 + Carg25019-RA Car11g00965 156918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00965 419 ProSitePatterns Tyrosine specific protein phosphatases active site. 153 163 IPR016130 GO:0016311|GO:0016791
Car11g00965 419 ProSiteProfiles Phosphatase tensin-type domain profile. 45 214 IPR029023 -
Car11g00965 419 ProSiteProfiles C2 tensin-type domain profile. 245 399 IPR014020 -
Car11g00965 419 Pfam Tyrosine phosphatase family 150 190 IPR026893 GO:0004721
Car11g00965 419 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 152 188 IPR000387 GO:0016311|GO:0016791
Car11g00965 419 Pfam C2 domain of PTEN tumour-suppressor protein 322 396 IPR014020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00965 Car-Chr11:6360529 Car14g00516 Car-Chr14:2830902 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00965 K01110 - csv:101212127 776.163