Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g00967 ATGGCGACCTCCAAATCCCAAAGGTCTCCTGAGGAGGTGGAAGACATTATCCTTCGCAAAGTATTCCTTGTCTCTCTCACCCCTCCTTCCGATTCCGATTCTCGCACCGTCTATCTCGAGCAAACCGCCGCCGAGCTCCTTAGCGAAGGCAAGCAATTGAGGATTTCGAGGGATGTAATGGAGCGTATCATAATTGATCGTCTATCGAGTAATTTCCCCTCTGCCGAACCTATTTTTCAGTACCTAATCGGCTGCTACCGTCGGGCTCACGACGAGACTAAGAAAATTGCCTCCATGAAGGATAGGAATTTACGGTCTGAGATTGAGATGGCGCTCAAACAAGCCAAGAAGTTGACGGTTTCCTATTGTAGGATTCATTTGGGGAATCCTGAATTGTTTTCGGGTGGGGATTTGGGTAGTAACTCCACTACTTCGCCTTTGCTTCCTTTGATTTTCTCTGAAGTTGGTAGCTCCATGGATGGATTTGGGGCTGGTACCAGTGTTGGTGGAGCCTATCACTGCCCTCCGGGTTTCATGGACGAGTTTTTCCGGGATTCGGATTTTGATACATTAGACCCCATATTGAGGGGGTTGTACGAGGATTTGAGGGGTACCGTCCTTAAAGTTTCGGCTCTTGGGAACTTCCAGCAGCCCTTAAGGGCACTTAGGTTTCTTGTTAGTTTTCCCATTGGGGCTAAATCTTTGGTTAATCATCCATGGTGGATTCCCCCTGGTAAATATTCCAATGGCCGTGTCATTGAGAGGACAAGTATTTTGGGGCCTTTCTTCCATGTCAGTGCTCTGCCCGACCATGCCATTTTTAAGAGCCAACCTGATGTTGGGCAGCAATGCTTTTCAGAAGCATTAACTCGTAGACCATCTGATTTACTCTCTTCATTCACTACAATTAAAACAGTCATGAATAACTTATATGATGGTCTTGCGGAAGTTCTTCTCTCTCTTCTTAAGAACACAGAGACCCGTGAAAATGTTCTTGAGTATCTTGCAGAGGTGATAAATAGAAACTCATCAAGGGCTCATATACAGGTTGATCCTCTCTCCTGTGCAAGTTCAGGCATGTTTGTTAATCTCAGTGCCATCATGCTACGTCTTTGTGAGCCATTTCTAGATGCAAACTTGACCAAAAGGGATAAAATTGATCCGAAATATGTATGTTATGGTAACCGCTTGGAGTTAAGAGGATTAACTGCTCTACATGCATCGTCTGAAGAAGTTACAGACTGGATTAATAATGGTACTCAGTTGAAAACTGATAACTCCGGGCAGTTCAGTGACAGTGAAAGTCGCTTGCTGCAATCCCAAGAAGCTTCTAGTTCTGGCAGTAATGCTACAATTGAATCTTCTACTGCAAAGGCAAGATCGAATAGTGTGAAGACTAGGTACCCTTTCATATGTGAGTGCTTCTTTATGACTGCAAGGGTGCTGAATTTGGGCTTGTTAAAAGCATTTTCGGACTTCAAGCATTTAGTACAGGATATATCTAGGTGTGAAGATACATTGGCCACACTCAAAGCCATGCAAGGACAAGGGCCTGCTCCACAGCTTGAAATGGATGTAGCTCGCCTTGAGAAGGAAATAGAGTTGTACTCACAGGAAAAGCTTTGTTTTGAAGCTCAAATACTGAGGGACGGGAGTCTAATCCAGCAAGCTCTTACTTTCTATCGATTAATGGTTGTATGGTTAGTTGGTTTGATTGGTGGATTTAAAATGCCTCTTCCATCAAGTTGCCCGATGGAATTTGCATCCATGCCAGAGCATTTTGTGGAAGATGCAATGGAATTGCTTATATTTGCTTCCCGAATTCCAAAAGCTTTGGACGGTATCAATTTGGATGATTTTATGAACTTCATCATTATGTTTATGGCAAGTCCGGAATATATTAGAAATCCTTACTTAAGAGCAAAGATGGTTGAAGTTCTCAACTGCTGGATTCCTCGTAGAAGTGGTTCATCTGTAACAGCAACATTATTTGAAGGCCACCAACTATCACTCGAGTATCTTGTCAGGAATCTCTTAAAGCTTTATGTGGACATTGAGTTCACTGGTTCACATACACAGTTTTATGACAAGTTCAACATCCGTCATAATATTGCCGAACTTCTCGAATACCTTTGGCAGGTTCCTAGTCATCGTAATGCTTGGAGAATGATTGCCAAGGAAGAGGAGAAGGGTGTTTACTTGAATTTCTTGAACTTCCTAATCAATGATAGCATATATCTTCTTGATGAAAGCCTTAATAAAATTCTCGAACTTAAAGAGCTTGAAGCTGAAATGTCAAATACTGCAGAATGGGAGCAACGACCTGCTCAAGAGAGGCAGGAGAGAACTAGGCTATTTCACTCCCAAGAAAATATCATCCGGATTGACATGAAATTAGCAAATGAGGATGTGAGTATGCTGGCATTTACAACAGAGCAAATCACAGCTCCTTTTCTACTTCCAGAGATGGTCGAACGGGTAGCCAGCATGCTTAATTATTTCCTCCTGCAACTTGTTGGTCCTCAGCGAAGATCTCTTAGTCTGAAAGACCCTGAAAAGTACGAATTCCGTCCAAAAGAGTTGCTTAAGCAGATTGTTCACATATATGTTCATCTGGCGAGAGGCGATAAGGAGAATATTTTCCCAGCTGCCATTTCGAAGGACGGAAGATCGTATAACGAGCAGTTGTTCAATGCTGCAGCAGTTGTACTTAGACGAATTGGAGAAGATGGTAGGATAATACAGGAATTTATTGCTCTTGGTAACAAGGCGAAGGATGCAGCTTCAGAGGCCATGGATGCTGAGGCTACTCTAGGAGATATACCGGATGAATTCCTTGACCCGATCCAATATACTTTAATGAAGGATCCTGTGATCTTACCTTCTTCAAGGATCACGGTCGACAGACCCGTCATTCAAAGACATCTCCTTAGCGATAGCACCGACCCGTTCAACCGATCTCATCTGACTTCGGACATGCTAATACCAAACGAAGAACTGAAAGCAAGGATCAAAGAGTTCATCATGTCAAAAAAATTGAAGAGGCAACCGGACGGAGGGGTTGCGATGCAGAGCAGCAAGGCGACGATCCAACCCACAAGCGGAGAAATGTTGATTGATTAA 3123 43.32 MATSKSQRSPEEVEDIILRKVFLVSLTPPSDSDSRTVYLEQTAAELLSEGKQLRISRDVMERIIIDRLSSNFPSAEPIFQYLIGCYRRAHDETKKIASMKDRNLRSEIEMALKQAKKLTVSYCRIHLGNPELFSGGDLGSNSTTSPLLPLIFSEVGSSMDGFGAGTSVGGAYHCPPGFMDEFFRDSDFDTLDPILRGLYEDLRGTVLKVSALGNFQQPLRALRFLVSFPIGAKSLVNHPWWIPPGKYSNGRVIERTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEALTRRPSDLLSSFTTIKTVMNNLYDGLAEVLLSLLKNTETRENVLEYLAEVINRNSSRAHIQVDPLSCASSGMFVNLSAIMLRLCEPFLDANLTKRDKIDPKYVCYGNRLELRGLTALHASSEEVTDWINNGTQLKTDNSGQFSDSESRLLQSQEASSSGSNATIESSTAKARSNSVKTRYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDTLATLKAMQGQGPAPQLEMDVARLEKEIELYSQEKLCFEAQILRDGSLIQQALTFYRLMVVWLVGLIGGFKMPLPSSCPMEFASMPEHFVEDAMELLIFASRIPKALDGINLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWIPRRSGSSVTATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRMIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWEQRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTTEQITAPFLLPEMVERVASMLNYFLLQLVGPQRRSLSLKDPEKYEFRPKELLKQIVHIYVHLARGDKENIFPAAISKDGRSYNEQLFNAAAVVLRRIGEDGRIIQEFIALGNKAKDAASEAMDAEATLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTSDMLIPNEELKARIKEFIMSKKLKRQPDGGVAMQSSKATIQPTSGEMLID 1040
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6377278 6384296 - Carg25017-RA Car11g00967 156920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g00967 1040 Coils Coil 519 546 - -
Car11g00967 1040 MobiDBLite consensus disorder prediction 1018 1040 - -
Car11g00967 1040 MobiDBLite consensus disorder prediction 423 456 - -
Car11g00967 1040 Pfam Ubiquitin elongating factor core 259 924 IPR019474 GO:0000151|GO:0006511|GO:0016567|GO:0034450
Car11g00967 1040 Pfam U-box domain 941 1012 IPR003613 GO:0004842|GO:0016567
Car11g00967 1040 ProSiteProfiles U-box domain profile. 940 1014 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g00967 Car-Chr11:6377278 Car14g00515 Car-Chr14:2819819 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g00967 K10597 - csv:101211398 1917.89