Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01011 CGTGCCGGTCGTCATAAAACCCCGGCAAACCTTCTCCCTCCGCTAATCTCTCGTCTTCTCCCCTTCCCTCCCTTCTCCGCTTCTCCGCTTCTCCACCTGCATTTTCCTCTGTTTTCCTCTGTTTTCGAAACCCTAAACCTTTTCATCTCAATCATTTCCAGCTTCACGCGGCTTGCTTTCAAACCCCCTTTTCCCGCTCTTCTTCTACTCACTATCTGCTCTTTTCTCCTTTTTTGCTTTCCCCATTTCTTCCTCTTTTTGCTCTGTTCTTACAGTCGGAAGGAACAGAGCAGCAGAGCCATGGCTAAGCTTTTGCTTCTTGGGTTTCTCTTATCAATGGCTTTTACCAAATGGGTTCATGCCTTTTACCCATTTAATCTCTCTGATTCATCGCTCTTTGATTCTTATGAAGCTTCCTTTGCTGTCACCGCTACTCCTCTCATGGTGCCTCTCACTCTCATTCATGGAGCTGATGCAAAACGAGCAGTCTGTTTGGATGGCACATTGCCTGGATATCACTTGCACCGTGGATATGGGTCGGGAGCTAATAGCTGGCTTGTGCAATTGGAGGGGGGTGGATGGTGTAATAATAGAAGGAATTGTGTCTACCGGAAGAATACGAGGCGTGGATCGTCGAGATTTATGGAGAAGCAAATACCATTTACAGGAATTCTGAGCAACAAAGCTGAAGAAAATCCTGATTTTTTTAACTGGAACAGAGTAAAGGTTCGTTACTGTGATGGCGCCTCGTTCACTGGGGATTCTGAGAACAAGGCTGAACAGTTGCAATTTAGAGGACAGCGGATTTGGTTGGCTGCAATGGAAGAATTGAGGGCCAAGGGAATGCGATTTGCGAAACAGGCCTTGCTTTCTGGCTGCTCGGCGGGAGGTTTGGCATCGATTCTACACTGTGATGAGTTTCGAGGCTTGTTTCCTAGTAATACTAAAGTGAAGTGTCTGAGTGATGCTGGACTATTCCTTGACGTGGCTGATATATCTGGTGGGCATTCTATTAGGAACTTATTTGGTGGTGTGGTGAGCTATCAGGGAGCTAAAAGGAATCTGCCATCCTTTTGTACAAACCATCTCGATCCAACTTCGTGTTTCTTCCCACAAAACATAATCGCTGGAATCAAAACGCCACTGTTTCTTGTCAACGCAGCATACGATTCCTGGCAGATACAATCTAGTCTTGCCCCACCTTCCCTCGACCCGGCCGGGTACTGGCATGATTGTAGGCTGAATCATGCAAAATGTAACCAACCTCAGATTCAATTTCTTCAAGGATTCAGGAACCAAATGTTGAATGTTGTAAGGGATTTCTCAAAATCTTACAAAAATGGATTGTTCATTAATTCATGTTTTGCTCACTGCCAAACCGAGCGACAGGATACGTGGTTCAGCGACAATTCCCCTGTCATCGGAAACAAGCCAATTGCTCTGGCTGTTGGAGACTGGTACTTCGACCGAGCAACTGTGAAAGCGGTCGATTGTGCGTATCCTTGTGACAGGAGTTGCCACCATCTGGTTTTTAGAAGCGGGTAG 1545 46.28 RAGRHKTPANLLPPLISRLLPFPPFSASPLLHLHFPLFSSVFETLNLFISIISSFTRLAFKPPFPALLLLTICSFLLFCFPHFFLFLLCSYSRKEQSSRAMAKLLLLGFLLSMAFTKWVHAFYPFNLSDSSLFDSYEASFAVTATPLMVPLTLIHGADAKRAVCLDGTLPGYHLHRGYGSGANSWLVQLEGGGWCNNRRNCVYRKNTRRGSSRFMEKQIPFTGILSNKAEENPDFFNWNRVKVRYCDGASFTGDSENKAEQLQFRGQRIWLAAMEELRAKGMRFAKQALLSGCSAGGLASILHCDEFRGLFPSNTKVKCLSDAGLFLDVADISGGHSIRNLFGGVVSYQGAKRNLPSFCTNHLDPTSCFFPQNIIAGIKTPLFLVNAAYDSWQIQSSLAPPSLDPAGYWHDCRLNHAKCNQPQIQFLQGFRNQMLNVVRDFSKSYKNGLFINSCFAHCQTERQDTWFSDNSPVIGNKPIALAVGDWYFDRATVKAVDCAYPCDRSCHHLVFRSG 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7073542 7077743 - Carg17002-RA Car11g01011 156964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01011 514 Pfam Pectinacetylesterase 144 492 IPR004963 GO:0016787
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g01047 Car11g01011 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00974 Car-Chr7:5525808 Car11g01011 Car-Chr11:7073542 1.32E-139 dispersed
Car10g01047 Car-Chr10:10771138 Car11g01011 Car-Chr11:7073542 0 dispersed
Car11g01011 Car-Chr11:7073542 Car16g00460 Car-Chr16:2922427 3.05E-148 dispersed
Car11g01011 Car-Chr11:7073542 Car04g00555 Car-Chr4:3139987 7.23E-149 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01011 K19882 - csv:101218273 785.023