Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01012 ATGGGCATTAAGGGTTTAACCAAGCTTTTAGCTGACAATGCCCCCAAAGGCATGAAGGAGCAGAAGTTCGAAAGCTATTTTGGACGAAAAATTGCAATTGATGCCAGCATGAGTATCTATCAATTTCTTATTGTCGTGGGAAGAAGTGGGACTGAGATGTTGACCAACGAAGCTGGTGAAGTCACTAGCCATTTGCAAGGGATGTTTAACCGGACAATAAGGCTTCTCGAAGCTGGAGTTAAGCCAGTCTATGTGTTTGATGGAAAGCCTCCTGATTTGAAAAAGCAAGAACTTGCAAAACGTTATTCAAAGAGAGCAGATGCTACTGCAGACCTGGCAGATGCAATTGAGGTTGGAAACAAGGAGGACATTGAGAAATTCAGTAAAAGGACGGTCAAGGTTACAAAGCAGCACAATGATGACTGTAAAAGACTTTTGAGACTCATGGGAGTGCCTGTGATCGAGGTTTATGCTGTGGCATCAGAAGACATGGATTCACTAACATTTGGATCTCCTAGATTTCTTCGTCATTTAATGGATCCCAGCTCAAGGAAGATCCCAGTTATGGAATTTGAAGTTGCAAAGATTTTGGAGGAGCTGAACCTTACCATGGATCAATTTGTCGATTTGTGCATTCTTTCTGGATGTGATTATTGTGACAGTATCCGAGGTATAGGGGGACAGACTGCTTTAAAGCTTATCCGTCAACATGGGTCTATAGAAAATATACTAGAGAACATCAATAAAGAAAGGTATCAAATTCCAGAGGGTTGGCCATTTCAAGAGGCCCGACAGCTTTTTAAAGAACCACTAGTGTGTACTGACGAAGAGCAACTTGACATTAAGTGGACTACTCCAGATGAAGAAGGCTTAATCTCATTTTTGGTGAATGAGAATGGGTTCAATAGCGATAGAGTAACAAAGGCAGTAGAAAAAATTAAAGCAGCCAAGAACAAGTCATCACAGGGCCGGATGGAGTCATTTTTCAAGCCCGTAACGAATCCTTCAGTATCCACTAAAAGAAAGGAGACATCAGAAAAGCCCACCAAACAAGCAATAACTAAGAAATCGAAGTCCAGTGGTGGTAAAAGAAAGTAG 1098 41.53 MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAKRYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEVYAVASEDMDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIRGIGGQTALKLIRQHGSIENILENINKERYQIPEGWPFQEARQLFKEPLVCTDEEQLDIKWTTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRMESFFKPVTNPSVSTKRKETSEKPTKQAITKKSKSSGGKRK 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7126140 7135981 + Carg17003-RA Car11g01012 156965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01012 365 MobiDBLite consensus disorder prediction 320 339 - -
Car11g01012 365 Hamap Flap endonuclease 1 [fen]. 1 330 IPR023426 GO:0016788
Car11g01012 365 ProSitePatterns XPG protein signature 1. 80 94 IPR019974 GO:0016788
Car11g01012 365 Pfam XPG I-region 156 217 IPR006086 GO:0004518
Car11g01012 365 Pfam XPG N-terminal domain 1 107 IPR006085 GO:0004518
Car11g01012 365 MobiDBLite consensus disorder prediction 317 365 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01012 Car-Chr11:7126140 Car16g00594 Car-Chr16:3766722 2.02E-13 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01012 K04799 - csv:101204273 668.692