Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01024 ATGGCTGGTGGTAGTGATTTGTTGCCACTCTTGGCTATGGTGGTTGTCCAATTCCTGTATGCAGGCTTGAATATTACATCAAAGTTAGCCATGGAGTTTGGGATGAATCCAATGGTTCTAGTTGCTTACAGGCAGATGTTTGGTACCATAGCCATAGCTCCTTGCGCTTATTGGTTTGAGAGGGCAACAGGAAATCAAGTGTTTTACTATGTTGGGTTAAAATATTCATCCCCCACCATCGCATGTGCATTGACCAATGTCCTGCCTGCTGCCACTTTTCTCCTCGCTCTTCTTTTCAGACAAGAATCTGTGGGGATCAAGACAACCCCAGGTGCAGCCAAGGTGATCGGGACTGTTGTGTGCGTCGGAGGGGCAATGTTGCTGTCGTTCTACCATGGACAAACCATCAACCTGGGTGAATCTGGGATTCATTGGAAGTATGCCGAGATGATGAGGGGGGGAAGTTCCAGCAGCCAAGGCAGCAGCGCCATCTGGGGCTGTCTCTACTTGATCATAAGCTCTGTTGCTTGGGCGGCTTGGTTTGTAATCCAAGCAAGGGTTAACTCTCAGTTTCCAGCTCCCTACACGAGCACAGCTATCATGACTTTCATGGCAACCATTCAATGTGGAGCAATCGCCGTTGGCATTGAGCACAACACAGCTGCAGCTTGGTCATTGAAAAGTCCAATCCGCCTTGTTGGTGCTCTCTATGCGGGAGTGGCGTGCTCAGGGGTTGCATTTTGCCTAACCTCCTGGAGTATCCAAAAGAAAGGTCCTCTCTATGCCTCAGTTTTCAGCCCCTTTTTGCTCATTATCGTGGCTATTTTCAGCTGGGCCTTCTTTCAAGAAAAGTTATACGTAGGAACTGTTGTAGGGTCATTGTTGATTGTTATTGGGCTATATGCTGTCCTATGGGGAAAGACCAAAGAGGTGAAACTACAACAGGTTAATGAAATGGCGGCAGTAGCAGAGGCAAAGCTGGATGAGTGTAATACCAAAGATGACTTGGAAGAACAGTCGTATGTGGTTTCAAATGGAAATATTCTCCATAAGTAA 1056 47.16 MAGGSDLLPLLAMVVVQFLYAGLNITSKLAMEFGMNPMVLVAYRQMFGTIAIAPCAYWFERATGNQVFYYVGLKYSSPTIACALTNVLPAATFLLALLFRQESVGIKTTPGAAKVIGTVVCVGGAMLLSFYHGQTINLGESGIHWKYAEMMRGGSSSSQGSSAIWGCLYLIISSVAWAAWFVIQARVNSQFPAPYTSTAIMTFMATIQCGAIAVGIEHNTAAAWSLKSPIRLVGALYAGVACSGVAFCLTSWSIQKKGPLYASVFSPFLLIIVAIFSWAFFQEKLYVGTVVGSLLIVIGLYAVLWGKTKEVKLQQVNEMAAVAEAKLDECNTKDDLEEQSYVVSNGNILHK 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7380756 7382563 - Carg27858-RA Car11g01024 156977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01024 351 Pfam EamA-like transporter family 165 304 IPR000620 GO:0016020|GO:0016021
Car11g01024 351 Coils Coil 313 333 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00933 Car-Chr5:9032763 Car11g01024 Car-Chr11:7380756 1.93E-138 dispersed
Car11g01024 Car-Chr11:7380756 Car15g01200 Car-Chr15:9339307 1.74E-68 dispersed
Car11g01024 Car-Chr11:7380756 Car11g01025 Car-Chr11:7454083 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01024 - - csv:101215353 584.334