Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01037 ATGGATGTGATTCTCTCTAAACTGGAAGAGCTGAGGAATTCCGATTCCATGGAGGAGCGACCGTGTAAACGCCGAAAAATCGAATCGGAGAATCGAATGGCGGATTTTCATGGCGCCGAATCCACGGATTTGAGAACACGGTGGAGAACAGAGTCGGAGCAGTATATTTACTCTTCAAAACTAGTTCAGGCTCTCCATCGAATCAGCCAGAAATCCGCATCACCGCTGGCGAGATCTTCAATTAGCGGCCGGAAAGTACGCGATACGGCGGATCGAGTTCTCGCCGTTGCCGCTAAAGGCAAGACGCGGTGGAGCAGAGCGATCTTGTCAAATCGACTGGATCTCAAACTCAAGAAGCAAAAGAAGGTGAAACCGGCCGGAAACTGCAGGTGGACGAAGAAATTGGAAGTATCGAAGACGAGGAAATTGCCGGCGGTACAGCGAAAAGTTCGAACTCTCAGCCGCCTGGTTCCCGGCTGCCGGAAAATCTCATTCCCGAACCTCCTTGAAGAAGCTACAGATTACATCGCCGCTCTACAGATGCAGGTCCGCGCCATGACAGCCGTTGCCGAGATTCTCGGCGGTGCTCCGGCCGATCGTCAAAGCTTCAGAACGAATTCGTAG 624 52.24 MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSKLVQALHRISQKSASPLARSSISGRKVRDTADRVLAVAAKGKTRWSRAILSNRLDLKLKKQKKVKPAGNCRWTKKLEVSKTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAALQMQVRAMTAVAEILGGAPADRQSFRTNS 207
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 7804188 7804811 + Carg27885-RA Car11g01037 156990
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car11g01037 207 PANTHER TRANSCRIPTION FACTOR BHLH149 16 202 - -
Car11g01037 207 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 148 194 IPR036638 GO:0046983
Car11g01037 207 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 16 202 IPR044660 GO:0006355
Car11g01037 207 CDD bHLH_AtIBH1_like 135 188 IPR044549 GO:0006355
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00940 Car-Chr5:9063250 Car11g01037 Car-Chr11:7804188 6.04E-61 dispersed
Car11g01037 Car-Chr11:7804188 Car12g00973 Car-Chr12:9812667 8.48E-55 dispersed
Car10g01016 Car-Chr10:10105771 Car11g01037 Car-Chr11:7804188 5.62E-100 wgd
Car10g01016 Car-Chr10:10105771 Car11g01037 Car-Chr11:7804188 5.62E-100 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01037 - - cmo:103492109 260.766