Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01047 ATGAGTCAGACAGAAGTATCAAGGATTAAACCCCCTCTCGTTCCGCTTGCTACCTTGATTGGTCGCGAGCTGAGGAACGAGAGGGTTGAGAAACCTTTTGTGAAGTATGGACAGGCTGCTTTGGCAAAGAAAGGAGAGGACTACTTTCTGATTAAACTTGATTACCACCGTATTCCTGGAAACCCTTCTACTGCATTTTCTGTTTTTGCGATTTTTGATGGGCATAATGGCATATCAGCCGCTATCTTTGCAAAGGAACATTTACTGGGTAATGTTTTAAGTGCAATTCCTCAAGGGGCCAGTCGAGAAAAATGGCTACAAGCCCTTCCTCGAGCATTAGTTGCTGGTTTTGTCAAAACTGACATAGAGTTTCAGCAAAAAGGGGAAACTTCTGGAACTACTGTTACATTTGTTGTGATTGATGGGTGGACTGTTACAGTGGCGTCCGTGGGAGATTCACGGTGCATATTAGACACCCAAGGAGGTGTGGTTTCTCTATTGACGGTTGATCATAGGCTGGAGGAAAATGAGGAAGAGAGGAAACGTGTAACTGCGAGTGGTGGTGAGGTTGGGAGGCTCAATGTTTTCGGCGGCAATGAGGTCGGTCCTCTCCGCTGCTGGCCTGGTGGCTTATGTCTTTCTAGGTCCATTGGTGATACAGATGTAGGAGAATATATTGTCCCGATACCGCATGTTAAGCAAGTGAAGCTTTCTAATGCTGGCGGACGACTAATAATTGCTTCTGATGGTATATGGGATGCTTTATCGTCTGATATGGCTGCAAAGTCTTGTCGTGGTTTACCTGCAGAGCTTGCTGCTAAGCTAGTTGTGAAGGAGGCTCTGCGGTCGAGGGGGTTGAAGGACGATACAACTTGCTTAGTTGTTGATATCATACCATCCGAGCAACCTATATTATTACCACCAACTCCAAGGACGAAGCAAAATGTGCTCACCACACTCTTTGGGAAGAAATATCAAAACTCTTTGGGCAAATCTGCAAATAAACTTTCTGCTGTTGGAGTGGTGGAGGAATTGTTTGAAGAAGGTTCCGCTATGCTTGCTGAAAGGTATAATTGA 1077 45.22 MSQTEVSRIKPPLVPLATLIGRELRNERVEKPFVKYGQAALAKKGEDYFLIKLDYHRIPGNPSTAFSVFAIFDGHNGISAAIFAKEHLLGNVLSAIPQGASREKWLQALPRALVAGFVKTDIEFQQKGETSGTTVTFVVIDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERKRVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSEQPILLPPTPRTKQNVLTTLFGKKYQNSLGKSANKLSAVGVVEELFEEGSAMLAERYN 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7986940 7989352 + Carg27573-RA Car11g01047 157000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01047 358 Pfam Protein phosphatase 2C 63 280 IPR001932 -
Car11g01047 358 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car10g01000 Car11g01047 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01548 Car-Chr4:8993847 Car11g01047 Car-Chr11:7986940 7.24E-143 dispersed
Car10g01000 Car-Chr10:9694805 Car11g01047 Car-Chr11:7986940 0 dispersed
Car11g01047 Car-Chr11:7986940 Car11g01601 Car-Chr11:12750873 1.73E-28 dispersed
Car11g01047 Car-Chr11:7986940 Car18g00925 Car-Chr18:9998470 5.11E-165 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01047 - - csv:101219622 669.077