Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01051 ATGACACCCGTTTGGAGCTATGTTCTGTCCAAGTGGCAAACGTTGTCCACTTCTGATCACGCCTCTGTGGTTTCCATTAACTTATTTGTAGCTCTTCTCTGTGCTTGTATTGTGATTGGTCATCTTCTTGAGGAGACCCGGTGGATGAATGAGTCGATCACTGCCCTCTTCATTGGTATGTTTACCGGAGTCATCATTTTACTGGTCAGTGGTGGGAAAAGTTCGCATTTATTGCTCTTCAGCGAAGACATATTCTTCATTTATCTTCTGCCACCTATCATATTCAATGCTGGGTTTCAGGTGAAAAAGAAGCAGTTCTTTGTTAACTTCATTACAATTATGCTGTTTGGAGCAATTGGTACATTAGTCTCTTGTTCAATCATCTCATTAGGAGCTTTTCAGATCTTTCAGAGAATGGATGTTGGAACACTGGATATTGCCGATATTTTAGCAATTGGAGCTATATTTGCAGCTACAGATTCTGTATGCACATTGCAGATATTAAACCAGGATGAAACACCTCTACTTTACAGTCTAGTATTTGGGGAGGGTGTAGTGAATGATGCTACATCTGTGGTGCTTTTCAATGCAATTCAGAGCTTAGACCTCAGTAAAGTTGATGCAAGAGTTGCTTTGCATTTTATCGGGAGCTTCTTTTATTTGTTTTCAACGAGCACTCTACTCGGAGTGTTTGTTGGGCTGCTGAGTGCTTATACAATCAGAAAGTTATATTTTGGCAGGCACTCGACAGATCGTGAGGTTGCTCTAATGATGCTCATGGCATACCTTTCATATATGCTGGCTGAATTATTAGATTTGAGTGGCATTCTCACAGTGTTCTTTTGTGGAATTGTAATGTCACACTATACATGGCATAATGTGACTGAGAGTTCAAGAGTTACCACTAAGCATGCTTTTGCTACCTTATCCTTCATTTCAGAGACGTTTATCTTCGTGTATGTTGGCATGGATGCCTTGGACATTGAGAAGTGGAGCTATGTCAGTGATAGTCCAGGGACATCTGTTGCTGTGAGTGCAATATTACTAGCTCTGGTTATGGTTGGAAGAGCTGCTTTTGTTTTTCCATTATCATTTTTATCCAACTTAGTTAAAAAATCGGCTTCCGAGAAAATTACCTTCAGGCAACAAGTTATAATCTGGTGGGCTGGTCTCATGAGAGGGGCTGTCTCTATTGCTCTTGCTTATCATCAGTTCACTAGAGCTGGCCACACTCAACTGCGGGGGAATGCAATTATGATAACTAGCACCGTAACTGTTGTCCTTTTTAGCACGATGGTGTTTGGGATATTGACCAAGCCTCTTATAAATTGTTTGGTACCTCACCCCAAAGACACCACCAGCTCCAGCATGCTATCGGAACCAGCGGCTCCAAAATCATTCTCGGTACCGCTACTCGGAAGTGCACAGGATTCGGAGGTGGATCTTGATAGTCCCAATATTCCTCGTCCAAGCAGTATCCGTGCACTCCTTGCGACTCCTACGCATACTGTTCATCGCTACTGGCGAAAATTTGATGATGCCTTCATGCGTCCAATGTTCGGGGGGCGGGGTTTTGTCCCCTTTGTTCCAGGATCGCCAACAGAAAGGGGTAGGCACTGA 1620 43.09 MTPVWSYVLSKWQTLSTSDHASVVSINLFVALLCACIVIGHLLEETRWMNESITALFIGMFTGVIILLVSGGKSSHLLLFSEDIFFIYLLPPIIFNAGFQVKKKQFFVNFITIMLFGAIGTLVSCSIISLGAFQIFQRMDVGTLDIADILAIGAIFAATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSLDLSKVDARVALHFIGSFFYLFSTSTLLGVFVGLLSAYTIRKLYFGRHSTDREVALMMLMAYLSYMLAELLDLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFISETFIFVYVGMDALDIEKWSYVSDSPGTSVAVSAILLALVMVGRAAFVFPLSFLSNLVKKSASEKITFRQQVIIWWAGLMRGAVSIALAYHQFTRAGHTQLRGNAIMITSTVTVVLFSTMVFGILTKPLINCLVPHPKDTTSSSMLSEPAAPKSFSVPLLGSAQDSEVDLDSPNIPRPSSIRALLATPTHTVHRYWRKFDDAFMRPMFGGRGFVPFVPGSPTERGRH 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8054318 8059566 + Carg26501-RA Car11g01051 157004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01051 539 Pfam Sodium/hydrogen exchanger family 29 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00973 Car-Chr1:9275838 Car11g01051 Car-Chr11:8054318 0 dispersed
Car10g00948 Car-Chr10:8052594 Car11g01051 Car-Chr11:8054318 0 dispersed
Car11g01051 Car-Chr11:8054318 Car17g01068 Car-Chr17:8308602 0 dispersed
Car11g01051 Car-Chr11:8054318 Car18g00580 Car-Chr18:6521603 1.18E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01051 - - csv:101214934 946.036