Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01052 ATGGGGTGTTTGGTTAGCCGACAGGCGTCTTCTAGAAGTGTAGAACCCCCTGTAGATAACGGGAAGAGGAATCAAATTACTGAGCCTGGTGTCCAAGTCGAGCATGTACAGGAAAAAGAACTAGAGCATGTTAATGCTAATGTAGAGGAGCATGCAAATGTGAGCAAGGAGGAGGAGCAGAAGGCTGATGGTGGTCAGGATCGGCCACGAGCAGAGCGGCGGAGGTCGAGGAAGGTTCCAAGGCCTGTTAACCTGCCAAACCATTCCCAGGGAGAGCAAGTTGCTGCTGGATGGCCATCTTGGCTCACAGCAGTTTGTGGGGAGGCTCTCAATGGTTGGATTCCAAGGAAGGCTGATACGTTTGAAAAGATTGATAAGATTGGACAAGGAACGTATAGCAATGTGTATAAGGCTAAAGATATACTTACAGGTAAAATTGTTGCACTGAAGAAGGTTCGATTTGACAATCTGGAACCGGAAAGTGTGAAATTTATGGCTAGAGAGATTCTAATCCTTCGGAGATTAAATCATAATAACGTTGTGAAATTGGAGGGGTTGGTCACATCGCGGATGTCTTGTAGTTTATACTTGGTGTTTGAGTACATGGAACATGATTTAGCTGGTCTTGCTGCAAATCCATCAATCAAGTTTACGGAATCTCAGGTTAAATGTTTCATGCAACAACTGCTATCTGGACTGGAACACTGTCACAATCGTCATGTGCTTCACCGTGATATTAAAGGATCTAATCTTCTCATTGATAGTGGGGGAGTGCTTAAGATTGCTGATTTTGGATTGGCTTCTTTCTTTGATCCTAATCACAAGCACCCAATGACTAGTCGAGTTGTTACCTTATGGTATCGACCTCCTGAACTTCTTCTTGGAGCAACTGATTATGGAGTAGGTGTAGACCTCTGGAGTGCTGGGTGTATACTGGCTGAGTTATTAGCTGGGAGGCCTATTATGCCTGGCCGTACAGAGGTGGAGCAACTACACAAGATATACAAGCTTTGTGGCTCCCCTTCAGATGAATATTGGAAAAGAGCAAAGCTTCCAAATGCAACATTATTTAAGCCCAGAGAACCTTATAAAAGATGTATAAAGGAGACATTTACAGATTTCCCGCTATCTTCCCTGCCCCTTATAGAAACGCTTCTTGCAATTGATCCAGTTGAACGAAAGACAGCAACAGATGCATTAAATAGCGAGTTCTTCATGACAGAGCCTTTAGCTTGCAAACCCTCCAGCCTCCCGAAATATCCTCCCAGTAAGGAGATGGATGCTAGAAGACGGGATGATGAAGCCCGGAGACTAAGAGCAGCTAACAAAGCCCAGGGAGATGGAGTGAAGAAAACACGCACACGTGTTAGGGCGATTCCAGCTCCTGAAGCCAATGCAGAAATACAAACAAATATCGATAGAAGGCGCTTAATTACACATGCAAATGCAAAGAGCAAAAGCGAAAAGTTCCCCCCACCGCACCAAGACGGAGCGCTTGGCTTTACGCTAGGATATTCACGGCATATGGATCCATCCGGTGTTCCTCCCGACATACCATTCAGCTCGACGCTGTTCACTTACTCTAAGGAGCCAGTCCAAGTCTGGTCTGGTCCACTGGTCCCTGGTGCTGGCACTGATGCTCCACCTAGGCAGAAGAAGCATGTGGGAGGTAAAGGCAAGAAAATCATGGTCTAA 1695 45.78 MGCLVSRQASSRSVEPPVDNGKRNQITEPGVQVEHVQEKELEHVNANVEEHANVSKEEEQKADGGQDRPRAERRRSRKVPRPVNLPNHSQGEQVAAGWPSWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDILTGKIVALKKVRFDNLEPESVKFMAREILILRRLNHNNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAANPSIKFTESQVKCFMQQLLSGLEHCHNRHVLHRDIKGSNLLIDSGGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIYKLCGSPSDEYWKRAKLPNATLFKPREPYKRCIKETFTDFPLSSLPLIETLLAIDPVERKTATDALNSEFFMTEPLACKPSSLPKYPPSKEMDARRRDDEARRLRAANKAQGDGVKKTRTRVRAIPAPEANAEIQTNIDRRRLITHANAKSKSEKFPPPHQDGALGFTLGYSRHMDPSGVPPDIPFSSTLFTYSKEPVQVWSGPLVPGAGTDAPPRQKKHVGGKGKKIMV 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8060519 8073522 - Carg26500-RA Car11g01052 157005

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01052 564 MobiDBLite consensus disorder prediction 1 92 - -
Car11g01052 564 MobiDBLite consensus disorder prediction 415 435 - -
Car11g01052 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Car11g01052 564 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Car11g01052 564 Pfam Protein kinase domain 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01052 564 MobiDBLite consensus disorder prediction 33 73 - -
Car11g01052 564 MobiDBLite consensus disorder prediction 1 31 - -
Car11g01052 564 Coils Coil 41 61 - -
Car11g01052 564 MobiDBLite consensus disorder prediction 539 564 - -
Car11g01052 564 ProSiteProfiles Protein kinase domain profile. 121 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01052 K08819 CDK12_13; cyclin-dependent kinase 12/13 [EC:2.7.11.22 2.7.11.23] - csv:101215893 1069.68
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00947 Car-Chr10:8002534 Car11g01052 Car-Chr11:8060519 0 dispersed
Car11g01052 Car-Chr11:8060519 Car12g01072 Car-Chr12:10502659 0 dispersed
Car11g01052 Car-Chr11:8060519 Car14g01474 Car-Chr14:12256152 0 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Car18g00857 . 1 294 Core Cell Cycle Gene Families AT3G48750 85.0 6.1e-150 527.3
Car04g01486 CCT 511 806 Core Cell Cycle Gene Families AT3G48750 82.8 2.7e-145 511.9
Car07g01149 . 1 300 Core Cell Cycle Gene Families AT3G48750 56.5 8.7e-96 347.4
Car07g01149 . 1 305 Core Cell Cycle Gene Families AT3G54180 84.1 6.2e-153 537.3
Car01g01609 . 11 332 Core Cell Cycle Gene Families AT3G54180 61.1 2.4e-112 402.5
Car18g00857 . 1 290 Core Cell Cycle Gene Families AT3G54180 53.8 1.4e-91 333.6
Car04g01486 CCT 511 802 Core Cell Cycle Gene Families AT3G54180 52.4 1.6e-87 320.1
Car07g01149 . 1 305 Core Cell Cycle Gene Families AT2G38620 71.8 1.6e-122 436.0
Car01g01609 . 11 332 Core Cell Cycle Gene Families AT2G38620 53.1 4.3e-88 321.6
Car01g01609 . 1 329 Core Cell Cycle Gene Families AT1G76540 78.7 1.0e-150 530.0
Car07g01149 . 1 300 Core Cell Cycle Gene Families AT1G76540 66.0 5.6e-117 417.9
Car18g00857 . 1 290 Core Cell Cycle Gene Families AT1G76540 53.4 7.3e-93 337.8
Car04g01486 CCT 508 802 Core Cell Cycle Gene Families AT1G76540 51.5 1.1e-88 323.9
Car01g01609 . 8 329 Core Cell Cycle Gene Families AT1G20930 82.3 7.5e-154 540.4
Car07g01149 . 1 303 Core Cell Cycle Gene Families AT1G20930 67.4 7.1e-120 427.6
Car18g00857 . 1 290 Core Cell Cycle Gene Families AT1G20930 55.4 7.1e-96 347.8
Car04g01486 CCT 508 802 Core Cell Cycle Gene Families AT1G20930 53.8 2.8e-92 335.9
Car04g02441 . 1 573 Core Cell Cycle Gene Families AT5G10270 66.4 1.9e-204 709.1
Car20g00013 . 1 485 Core Cell Cycle Gene Families AT5G10270 68.2 4.7e-190 661.4
Car10g00947 CCT,ECH 99 417 Core Cell Cycle Gene Families AT5G10270 51.3 1.6e-97 354.0
Car01g00780 CCT,ECH 135 451 Core Cell Cycle Gene Families AT5G10270 53.5 2.1e-97 353.6
Car04g00518 CST 123 439 Core Cell Cycle Gene Families AT5G10270 54.7 2.7e-97 353.2
Car11g01052 . 113 431 Core Cell Cycle Gene Families AT5G10270 51.6 4.6e-97 352.4
Car20g00175 CCT,CST,ECH 522 838 Core Cell Cycle Gene Families AT5G10270 53.2 6.7e-96 348.6
Car16g00361 CST 123 439 Core Cell Cycle Gene Families AT5G10270 54.1 3.3e-95 346.3
Car12g01072 CCT,ECH 201 519 Core Cell Cycle Gene Families AT5G10270 51.6 5.6e-95 345.5
Car14g01474 CST 113 429 Core Cell Cycle Gene Families AT5G10270 51.7 9.6e-95 344.7
Car06g00743 . 148 464 Core Cell Cycle Gene Families AT5G10270 50.9 3.7e-94 342.8
Car01g00746 . 119 437 Core Cell Cycle Gene Families AT5G10270 51.0 2.0e-92 337.0
Car04g01945 . 146 459 Core Cell Cycle Gene Families AT5G10270 51.1 2.0e-92 337.0
Car13g00669 . 72 375 Core Cell Cycle Gene Families AT5G10270 53.8 4.5e-92 335.9
Car09g01138 . 2 305 Core Cell Cycle Gene Families AT5G10270 52.0 1.7e-91 334.0
Car06g01263 CST 99 416 Core Cell Cycle Gene Families AT5G10270 50.9 6.5e-91 332.0
Car04g02441 . 86 572 Core Cell Cycle Gene Families AT5G64960 68.1 2.3e-175 612.5
Car20g00013 . 65 484 Core Cell Cycle Gene Families AT5G64960 63.5 3.3e-150 528.9
Car20g00175 CCT,CST,ECH 576 838 Core Cell Cycle Gene Families AT5G64960 54.0 1.9e-81 300.4
Car04g00518 CST 177 439 Core Cell Cycle Gene Families AT5G64960 54.3 2.5e-81 300.1
Car10g00947 CCT,ECH 153 417 Core Cell Cycle Gene Families AT5G64960 50.7 1.2e-80 297.7
Car02g00082 CCT,CST,ECH 175 439 Core Cell Cycle Gene Families AT5G64960 52.5 2.7e-80 296.6
Car11g01052 . 167 431 Core Cell Cycle Gene Families AT5G64960 51.1 2.7e-80 296.6
Car01g00780 CCT,ECH 189 451 Core Cell Cycle Gene Families AT5G64960 52.9 8.0e-80 295.0
Car13g00669 . 113 375 Core Cell Cycle Gene Families AT5G64960 52.9 1.0e-79 294.7
Car09g01138 . 43 305 Core Cell Cycle Gene Families AT5G64960 52.9 1.8e-79 293.9
Car16g00361 CST 177 439 Core Cell Cycle Gene Families AT5G64960 53.6 3.0e-79 293.1
Car06g00743 . 202 464 Core Cell Cycle Gene Families AT5G64960 51.8 6.8e-79 292.0
Car04g01945 . 197 459 Core Cell Cycle Gene Families AT5G64960 51.8 1.5e-78 290.8
Car12g01072 CCT,ECH 255 519 Core Cell Cycle Gene Families AT5G64960 50.7 3.4e-78 289.7
Car14g01474 CST 167 429 Core Cell Cycle Gene Families AT5G64960 50.7 3.4e-78 289.7
Car01g00746 . 173 437 Core Cell Cycle Gene Families AT5G64960 50.4 6.3e-77 285.4
Car11g00272 CST 4 441 Core Cell Cycle Gene Families AT1G73690 69.9 2.3e-168 589.0
Car10g00299 CST 493 926 Core Cell Cycle Gene Families AT1G73690 61.5 2.3e-147 519.2
Car11g00272 CST 12 369 Core Cell Cycle Gene Families AT1G66750 71.3 3.2e-150 528.5
Car10g00299 CST 501 855 Core Cell Cycle Gene Families AT1G66750 62.0 2.9e-130 462.2
Car11g00272 CST 8 442 Core Cell Cycle Gene Families AT1G18040 70.3 7.8e-169 590.5
Car10g00299 CST 497 927 Core Cell Cycle Gene Families AT1G18040 62.4 1.5e-148 523.1
Car07g01242 . 20 484 Core Cell Cycle Gene Families AT5G63610 77.7 9.6e-206 713.4
Car05g01260 CST 1 481 Core Cell Cycle Gene Families AT4G28980 61.8 2.3e-170 595.9
Car12g01227 CST 1 479 Core Cell Cycle Gene Families AT4G28980 60.2 7.6e-166 580.9
Car15g00608 . 5 491 Core Cell Cycle Gene Families AT1G44110 60.5 8.6e-151 530.8
Car17g00774 CST 207 503 Core Cell Cycle Gene Families AT1G44110 52.9 1.6e-88 323.9
Car08g00540 CST 227 505 Core Cell Cycle Gene Families AT1G44110 54.1 2.3e-87 320.1
Car04g01296 . 203 470 Core Cell Cycle Gene Families AT1G44110 56.7 3.9e-87 319.3
Car09g00418 . 196 464 Core Cell Cycle Gene Families AT1G44110 56.9 3.7e-85 312.8
Car01g01408 CCT,CST,ECH 302 585 Core Cell Cycle Gene Families AT1G44110 52.5 2.9e-82 303.1
Car09g00224 CCT,CST,ECH 98 377 Core Cell Cycle Gene Families AT1G44110 52.5 6.5e-82 302.0
Car12g00289 . 179 450 Core Cell Cycle Gene Families AT1G44110 51.3 5.5e-73 272.3
Car12g00532 CCT,CST,ECH 88 324 Core Cell Cycle Gene Families AT1G44110 54.9 2.7e-72 270.0
Car04g02306 . 3 130 Core Cell Cycle Gene Families AT1G44110 80.5 3.1e-55 213.4
Car04g01296 . 203 470 Core Cell Cycle Gene Families AT1G77390 54.1 4.2e-78 289.3
Car17g00774 CST 225 499 Core Cell Cycle Gene Families AT1G77390 51.6 7.9e-77 285.0
Car08g00540 CST 226 501 Core Cell Cycle Gene Families AT1G77390 51.1 1.4e-76 284.3
Car09g00418 . 196 464 Core Cell Cycle Gene Families AT1G77390 51.7 5.7e-75 278.9
Car09g00224 CCT,CST,ECH 103 375 Core Cell Cycle Gene Families AT1G77390 50.5 2.4e-73 273.5
Car01g01408 CCT,CST,ECH 307 583 Core Cell Cycle Gene Families AT1G77390 50.9 3.1e-73 273.1
Car12g00532 CCT,CST,ECH 88 324 Core Cell Cycle Gene Families AT1G77390 50.2 9.7e-67 251.5
Car12g00289 . 179 441 Core Cell Cycle Gene Families AT1G77390 50.8 3.7e-66 249.6
Car04g02306 . 1 130 Core Cell Cycle Gene Families AT1G77390 67.7 1.3e-47 188.0
Car04g01296 . 15 481 Core Cell Cycle Gene Families AT5G25380 54.3 7.1e-118 421.4
Car09g00418 . 10 462 Core Cell Cycle Gene Families AT5G25380 52.8 1.3e-114 410.6
Car08g00540 CST 225 505 Core Cell Cycle Gene Families AT5G25380 63.0 4.3e-99 359.0
Car17g00774 CST 223 503 Core Cell Cycle Gene Families AT5G25380 63.0 1.6e-98 357.1
Car12g00289 . 8 439 Core Cell Cycle Gene Families AT5G25380 51.4 1.4e-94 344.0
Car15g00608 . 211 486 Core Cell Cycle Gene Families AT5G25380 53.6 7.7e-80 295.0
Car09g00224 CCT,CST,ECH 102 370 Core Cell Cycle Gene Families AT5G25380 51.3 8.2e-74 275.0
Car04g02306 . 2 130 Core Cell Cycle Gene Families AT5G25380 58.1 4.7e-37 152.9
Car09g00418 . 44 412 Core Cell Cycle Gene Families AT5G11300 56.6 2.4e-99 359.8
Car12g00289 . 51 386 Core Cell Cycle Gene Families AT5G11300 53.1 1.7e-76 283.9
Car15g00608 . 211 431 Core Cell Cycle Gene Families AT5G11300 56.1 3.1e-67 253.1
Car12g00532 CCT,CST,ECH 90 308 Core Cell Cycle Gene Families AT5G11300 53.0 3.0e-62 236.5
Car09g00224 CCT,CST,ECH 98 314 Core Cell Cycle Gene Families AT5G11300 55.3 8.8e-62 235.0
Car01g01408 CCT,CST,ECH 302 522 Core Cell Cycle Gene Families AT5G11300 53.8 2.4e-59 226.9
Car04g02306 . 2 131 Core Cell Cycle Gene Families AT5G11300 58.5 7.5e-37 152.1
Car08g00540 CST 158 505 Core Cell Cycle Gene Families AT1G15570 61.3 3.2e-118 422.5
Car17g00774 CST 157 503 Core Cell Cycle Gene Families AT1G15570 60.4 1.2e-117 420.6
Car15g00608 . 195 490 Core Cell Cycle Gene Families AT1G15570 51.8 2.3e-79 293.5
Car09g00224 CCT,CST,ECH 98 367 Core Cell Cycle Gene Families AT1G15570 52.2 1.2e-75 281.2
Car12g00532 CCT,CST,ECH 76 324 Core Cell Cycle Gene Families AT1G15570 52.2 8.1e-69 258.5
Car08g00540 CST 4 505 Core Cell Cycle Gene Families AT1G80370 51.0 1.1e-118 424.1
Car17g00774 CST 4 503 Core Cell Cycle Gene Families AT1G80370 50.4 1.2e-115 414.1
Car15g00608 . 212 491 Core Cell Cycle Gene Families AT1G80370 54.6 2.7e-80 296.6
Car09g00224 CCT,CST,ECH 98 375 Core Cell Cycle Gene Families AT1G80370 50.7 1.0e-74 278.1
Car12g00532 CCT,CST,ECH 63 324 Core Cell Cycle Gene Families AT1G80370 52.1 8.9e-71 265.0
Car09g00224 CCT,CST,ECH 1 380 Core Cell Cycle Gene Families AT5G43080 55.9 2.5e-110 396.0
Car01g01408 CCT,CST,ECH 211 588 Core Cell Cycle Gene Families AT5G43080 56.4 1.6e-109 393.3
Car05g00137 CCT,CST,ECH 6 399 Core Cell Cycle Gene Families AT5G43080 54.4 2.8e-109 392.5
Car12g00532 CCT,CST,ECH 3 327 Core Cell Cycle Gene Families AT5G43080 57.1 1.4e-92 337.0
Car15g00608 . 213 492 Core Cell Cycle Gene Families AT5G43080 52.5 1.0e-79 294.3
Car04g01296 . 205 471 Core Cell Cycle Gene Families AT5G43080 53.6 9.1e-76 281.2
Car08g00540 CST 229 505 Core Cell Cycle Gene Families AT5G43080 52.2 2.0e-75 280.0
Car17g00774 CST 209 503 Core Cell Cycle Gene Families AT5G43080 50.3 1.3e-74 277.3
Car09g00418 . 198 475 Core Cell Cycle Gene Families AT5G43080 50.7 8.5e-74 274.6
Car05g00137 CCT,CST,ECH 1 399 Core Cell Cycle Gene Families AT1G47210 54.0 1.0e-117 420.6
Car09g00224 CCT,CST,ECH 1 380 Core Cell Cycle Gene Families AT1G47210 54.2 6.4e-112 401.4
Car01g01408 CCT,CST,ECH 211 588 Core Cell Cycle Gene Families AT1G47210 53.8 1.6e-110 396.7
Car12g00532 CCT,CST,ECH 1 324 Core Cell Cycle Gene Families AT1G47210 58.7 3.3e-100 362.5
Car04g01296 . 206 471 Core Cell Cycle Gene Families AT1G47210 53.4 8.7e-77 284.6
Car08g00540 CST 229 500 Core Cell Cycle Gene Families AT1G47210 51.6 4.3e-76 282.3
Car17g00774 CST 226 498 Core Cell Cycle Gene Families AT1G47210 51.1 8.2e-75 278.1
Car09g00418 . 198 457 Core Cell Cycle Gene Families AT1G47210 50.8 5.5e-71 265.4
Car09g00224 CCT,CST,ECH 98 378 Core Cell Cycle Gene Families AT1G47220 59.8 2.6e-93 339.3
Car01g01408 CCT,CST,ECH 286 586 Core Cell Cycle Gene Families AT1G47220 55.8 4.9e-92 335.1
Car05g00137 CCT,CST,ECH 91 399 Core Cell Cycle Gene Families AT1G47220 54.4 1.1e-88 323.9
Car12g00532 CCT,CST,ECH 79 324 Core Cell Cycle Gene Families AT1G47220 58.9 4.5e-77 285.4
Car04g01296 . 205 471 Core Cell Cycle Gene Families AT1G47220 50.6 7.7e-69 258.1
Car01g01408 CCT,CST,ECH 211 588 Core Cell Cycle Gene Families AT1G47230 57.3 6.6e-117 417.9
Car09g00224 CCT,CST,ECH 1 380 Core Cell Cycle Gene Families AT1G47230 56.7 3.6e-115 412.1
Car05g00137 CCT,CST,ECH 1 399 Core Cell Cycle Gene Families AT1G47230 54.3 6.8e-114 407.9
Car12g00532 CCT,CST,ECH 1 324 Core Cell Cycle Gene Families AT1G47230 57.5 1.1e-95 347.4
Car15g00608 . 214 495 Core Cell Cycle Gene Families AT1G47230 50.9 8.7e-77 284.6
Car08g00540 CST 230 500 Core Cell Cycle Gene Families AT1G47230 52.4 1.5e-73 273.9
Car17g00774 CST 228 498 Core Cell Cycle Gene Families AT1G47230 51.6 1.7e-72 270.4
Car04g01296 . 206 471 Core Cell Cycle Gene Families AT1G47230 51.3 2.4e-71 266.5
Car09g00418 . 199 457 Core Cell Cycle Gene Families AT1G47230 50.8 4.8e-67 252.3
Car02g01078 . 113 306 Core Cell Cycle Gene Families AT5G06150 64.1 2.7e-61 233.0
Car02g01078 . 14 403 Core Cell Cycle Gene Families AT2G26760 55.8 6.9e-109 391.3
Car07g00340 . 25 463 Core Cell Cycle Gene Families AT2G17620 58.2 5.4e-123 438.3
Car03g00582 . 32 426 Core Cell Cycle Gene Families AT2G17620 61.3 1.5e-120 430.3
Car01g01581 . 35 436 Core Cell Cycle Gene Families AT2G17620 53.1 1.4e-107 387.1
Car07g00340 . 5 395 Core Cell Cycle Gene Families AT4G35620 56.5 5.6e-103 371.7
Car03g00582 . 28 383 Core Cell Cycle Gene Families AT4G35620 59.5 4.0e-101 365.5
Car01g01581 . 35 391 Core Cell Cycle Gene Families AT4G35620 53.2 4.3e-87 318.9
Car02g01078 . 139 365 Core Cell Cycle Gene Families AT4G35620 50.9 9.6e-55 211.5
Car01g01581 . 1 434 Core Cell Cycle Gene Families AT1G20610 64.3 9.5e-144 507.3
Car03g00582 . 1 426 Core Cell Cycle Gene Families AT1G20610 54.8 9.3e-115 411.0
Car07g00340 . 41 463 Core Cell Cycle Gene Families AT1G20610 54.4 5.6e-112 401.7
Car01g01581 . 1 331 Core Cell Cycle Gene Families AT1G76310 64.0 4.0e-105 378.6
Car03g00582 . 1 322 Core Cell Cycle Gene Families AT1G76310 52.3 6.7e-76 281.6
Car07g00340 . 1 335 Core Cell Cycle Gene Families AT1G76310 50.6 2.4e-73 273.1
Car02g01078 . 137 305 Core Cell Cycle Gene Families AT1G76310 53.8 8.3e-42 168.3
Car05g00808 CCT,CST,ECH 1 326 Core Cell Cycle Gene Families AT1G70210 64.7 7.9e-109 391.0
Car04g00277 . 1 335 Core Cell Cycle Gene Families AT1G70210 62.1 1.2e-104 377.1
Car04g01638 . 1 327 Core Cell Cycle Gene Families AT1G70210 61.7 2.5e-99 359.4
Car12g00689 . 1 323 Core Cell Cycle Gene Families AT1G70210 60.2 7.4e-99 357.8
Car03g00762 . 47 309 Core Cell Cycle Gene Families AT2G22490 55.4 5.0e-77 285.4
Car12g00689 . 38 230 Core Cell Cycle Gene Families AT2G22490 50.3 1.2e-43 174.5
Car04g00447 . 56 340 Core Cell Cycle Gene Families AT4G34160 53.6 5.7e-76 282.0
Car09g00219 CCT,CST,ECH 71 300 Core Cell Cycle Gene Families AT4G34160 53.9 8.6e-64 241.5
Car01g01415 CCT,CST,ECH 71 296 Core Cell Cycle Gene Families AT4G34160 52.7 2.3e-61 233.4
Car11g01112 . 59 293 Core Cell Cycle Gene Families AT4G34160 51.1 1.2e-60 231.1
Car03g00762 . 41 244 Core Cell Cycle Gene Families AT5G65420 65.7 1.2e-70 263.8
Car07g00501 . 41 259 Core Cell Cycle Gene Families AT5G65420 56.5 8.9e-63 237.7
Car05g00478 . 26 230 Core Cell Cycle Gene Families AT5G65420 54.1 3.5e-59 225.7
Car12g00196 . 59 251 Core Cell Cycle Gene Families AT5G65420 55.1 1.7e-58 223.4
Car03g00762 . 9 220 Core Cell Cycle Gene Families AT5G10440 54.9 7.9e-57 217.6
Car07g00501 . 43 218 Core Cell Cycle Gene Families AT5G10440 55.4 2.1e-49 193.0
Car12g00196 . 54 229 Core Cell Cycle Gene Families AT5G10440 52.2 2.1e-49 193.0
Car05g00478 . 21 176 Core Cell Cycle Gene Families AT5G10440 58.3 6.0e-49 191.4
Car07g00715 . 1 291 Core Cell Cycle Gene Families AT5G27620 62.2 9.4e-98 354.0
Car02g01152 CCT,CST 1 86 Core Cell Cycle Gene Families AT2G27960 90.7 5.7e-43 170.2
Car13g00200 CCT 1 86 Core Cell Cycle Gene Families AT2G27960 89.5 1.6e-42 168.7
Car20g00470 CCT,CST 1 82 Core Cell Cycle Gene Families AT2G27960 92.7 1.8e-41 165.2
Car02g01152 CCT,CST 1 76 Core Cell Cycle Gene Families AT2G27970 92.1 2.1e-39 158.3
Car13g00200 CCT 1 83 Core Cell Cycle Gene Families AT2G27970 83.1 3.1e-38 154.5
Car20g00470 CCT,CST 1 76 Core Cell Cycle Gene Families AT2G27970 89.5 5.2e-38 153.7
Car04g01394 . 4 1024 Core Cell Cycle Gene Families AT3G12280 72.2 0.0e+00 1408.7
Car18g00779 . 1 931 Core Cell Cycle Gene Families AT3G12280 73.1 0.0e+00 1311.6
Car08g00360 . 17 472 Core Cell Cycle Gene Families AT1G02970 55.0 2.7e-142 502.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000603 3 3 4 2 3 3 5 2 2 3 3 3 5 3 3 5 2 4 5 2 3 3 3 3 3 3 3 3 1 2 92
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89188 PF00069 Pkinase 4.60E-67 CL0016 Car PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Car11g01052 Car_Chr11 FPKM 25.958462 31.235823 51.827553 47.829967 15.752753 17.679359 16.938005 80.80658 78.520393 84.253075