Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g01052 | ATGGGGTGTTTGGTTAGCCGACAGGCGTCTTCTAGAAGTGTAGAACCCCCTGTAGATAACGGGAAGAGGAATCAAATTACTGAGCCTGGTGTCCAAGTCGAGCATGTACAGGAAAAAGAACTAGAGCATGTTAATGCTAATGTAGAGGAGCATGCAAATGTGAGCAAGGAGGAGGAGCAGAAGGCTGATGGTGGTCAGGATCGGCCACGAGCAGAGCGGCGGAGGTCGAGGAAGGTTCCAAGGCCTGTTAACCTGCCAAACCATTCCCAGGGAGAGCAAGTTGCTGCTGGATGGCCATCTTGGCTCACAGCAGTTTGTGGGGAGGCTCTCAATGGTTGGATTCCAAGGAAGGCTGATACGTTTGAAAAGATTGATAAGATTGGACAAGGAACGTATAGCAATGTGTATAAGGCTAAAGATATACTTACAGGTAAAATTGTTGCACTGAAGAAGGTTCGATTTGACAATCTGGAACCGGAAAGTGTGAAATTTATGGCTAGAGAGATTCTAATCCTTCGGAGATTAAATCATAATAACGTTGTGAAATTGGAGGGGTTGGTCACATCGCGGATGTCTTGTAGTTTATACTTGGTGTTTGAGTACATGGAACATGATTTAGCTGGTCTTGCTGCAAATCCATCAATCAAGTTTACGGAATCTCAGGTTAAATGTTTCATGCAACAACTGCTATCTGGACTGGAACACTGTCACAATCGTCATGTGCTTCACCGTGATATTAAAGGATCTAATCTTCTCATTGATAGTGGGGGAGTGCTTAAGATTGCTGATTTTGGATTGGCTTCTTTCTTTGATCCTAATCACAAGCACCCAATGACTAGTCGAGTTGTTACCTTATGGTATCGACCTCCTGAACTTCTTCTTGGAGCAACTGATTATGGAGTAGGTGTAGACCTCTGGAGTGCTGGGTGTATACTGGCTGAGTTATTAGCTGGGAGGCCTATTATGCCTGGCCGTACAGAGGTGGAGCAACTACACAAGATATACAAGCTTTGTGGCTCCCCTTCAGATGAATATTGGAAAAGAGCAAAGCTTCCAAATGCAACATTATTTAAGCCCAGAGAACCTTATAAAAGATGTATAAAGGAGACATTTACAGATTTCCCGCTATCTTCCCTGCCCCTTATAGAAACGCTTCTTGCAATTGATCCAGTTGAACGAAAGACAGCAACAGATGCATTAAATAGCGAGTTCTTCATGACAGAGCCTTTAGCTTGCAAACCCTCCAGCCTCCCGAAATATCCTCCCAGTAAGGAGATGGATGCTAGAAGACGGGATGATGAAGCCCGGAGACTAAGAGCAGCTAACAAAGCCCAGGGAGATGGAGTGAAGAAAACACGCACACGTGTTAGGGCGATTCCAGCTCCTGAAGCCAATGCAGAAATACAAACAAATATCGATAGAAGGCGCTTAATTACACATGCAAATGCAAAGAGCAAAAGCGAAAAGTTCCCCCCACCGCACCAAGACGGAGCGCTTGGCTTTACGCTAGGATATTCACGGCATATGGATCCATCCGGTGTTCCTCCCGACATACCATTCAGCTCGACGCTGTTCACTTACTCTAAGGAGCCAGTCCAAGTCTGGTCTGGTCCACTGGTCCCTGGTGCTGGCACTGATGCTCCACCTAGGCAGAAGAAGCATGTGGGAGGTAAAGGCAAGAAAATCATGGTCTAA | 1695 | 45.78 | MGCLVSRQASSRSVEPPVDNGKRNQITEPGVQVEHVQEKELEHVNANVEEHANVSKEEEQKADGGQDRPRAERRRSRKVPRPVNLPNHSQGEQVAAGWPSWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDILTGKIVALKKVRFDNLEPESVKFMAREILILRRLNHNNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAANPSIKFTESQVKCFMQQLLSGLEHCHNRHVLHRDIKGSNLLIDSGGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIYKLCGSPSDEYWKRAKLPNATLFKPREPYKRCIKETFTDFPLSSLPLIETLLAIDPVERKTATDALNSEFFMTEPLACKPSSLPKYPPSKEMDARRRDDEARRLRAANKAQGDGVKKTRTRVRAIPAPEANAEIQTNIDRRRLITHANAKSKSEKFPPPHQDGALGFTLGYSRHMDPSGVPPDIPFSSTLFTYSKEPVQVWSGPLVPGAGTDAPPRQKKHVGGKGKKIMV | 564 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8060519 | 8073522 | - | Carg26500-RA | Car11g01052 | 157005 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g01052 | 564 | MobiDBLite | consensus disorder prediction | 1 | 92 | - | - | |
Car11g01052 | 564 | MobiDBLite | consensus disorder prediction | 415 | 435 | - | - | |
Car11g01052 | 564 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 241 | 253 | IPR008271 | GO:0004672|GO:0006468 | |
Car11g01052 | 564 | ProSitePatterns | Protein kinases ATP-binding region signature. | 127 | 150 | IPR017441 | GO:0005524 | |
Car11g01052 | 564 | Pfam | Protein kinase domain | 121 | 405 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car11g01052 | 564 | MobiDBLite | consensus disorder prediction | 33 | 73 | - | - | |
Car11g01052 | 564 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Car11g01052 | 564 | Coils | Coil | 41 | 61 | - | - | |
Car11g01052 | 564 | MobiDBLite | consensus disorder prediction | 539 | 564 | - | - | |
Car11g01052 | 564 | ProSiteProfiles | Protein kinase domain profile. | 121 | 405 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car10g00947 | Car-Chr10:8002534 | Car11g01052 | Car-Chr11:8060519 | 0 | dispersed | |
Car11g01052 | Car-Chr11:8060519 | Car12g01072 | Car-Chr12:10502659 | 0 | dispersed | |
Car11g01052 | Car-Chr11:8060519 | Car14g01474 | Car-Chr14:12256152 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89188 | PF00069 | Pkinase | 4.60E-67 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g01052 | K08819 | - | csv:101215893 | 1069.68 |