Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01097 ATGAATTTCAGGAACTTTGAGGATATGCCACCAGGAGAAGGCACGGTGGCTAAGACACAAGGAAATTTCACATTGGCTAGACAGCCTTCTATATACTCTTTAACTTTTGATGAGATTCAGAACACATGGAGTGGGCTCGGAAAGGAGGTCGGTTCGATGAATATGGATGAACTTCTGAAGAACATTTGGACTGCTGAAGAGTCTCAAGCAATGACATCTGGTGGTGGTGGAAGCGCGTTTGGTGGGAACTTGCAGAGGCAAGGATCGTTGACTTTACCCCGAACGATTAGTCAAAAGACGGTCGATGAAGTTTGGAAAGGCTTGAGTAAAGAGAACGTTAGTGTTGAAGATGGCAGTGGAATCGAGGCAATGCCTCGGCGAGAACCGACGTTAGGGGAGGTGACTTTGGAGGAGTTTTTGGTTAGAGCAGGAGTGGTAAGAGAAGAACCATTTAACTGTGGATTTTATAACCAAAATGCTGGTTTGGCTGTTGGGATGCTCATGGAAAATCAGATGTCTGAGAACAAAAACATGGTTTCTGTTCATAATCAAAATGCTGTTCTTTTAGGGACAGGAGTGGTAAGGCCATCTCAGCAGCAGCAGCAGCAGCAGCAGCCACTTTTCCCCAAACCAGCTACTGTGACCTTTGCTTCTTCAATGAATTCAGTGAACAATCCCCAGCTTACTAATAACATGGTTTTGGCTTCCAAGCCTCCTTTACATGAAGCTTTGATTCAGGGCAGCGGGGTCGGTGCGATTGGTTTAGGCTCGAGAGGGGTAACGGTTGCTTCAAGATCTCCTACGAGTACAATATCATCTGATGTGATTACAAAAAACAGCATAAGGACATCTTCATATTCGCCGGTTCCAGTTCCGTATTCGTTTGGCCGGGGACGACGAAGCAATGGAGCTCTGGAGAAAGTTGTCGAGAGGAGGCAACGACGAATGATAAAGAACCGAGAGTCAGCTGCGAGATCACGAGCTCGTAAACAGGCTTACACCATGGAGCTTGAAGCAGAAATTGCAAAACTCAAAGAAGTGAACCAAGAGTTGCAGAACACACAGAGAGAGATAATGGAAACCCAGAAAGATAAGGTTCTGGAGAAGATGAAATGTCAGTGGGGTGACAAAAGACTCTGCTTAAGAAGAACATTGACAGGCCCATGGTAG 1170 45.81 MNFRNFEDMPPGEGTVAKTQGNFTLARQPSIYSLTFDEIQNTWSGLGKEVGSMNMDELLKNIWTAEESQAMTSGGGGSAFGGNLQRQGSLTLPRTISQKTVDEVWKGLSKENVSVEDGSGIEAMPRREPTLGEVTLEEFLVRAGVVREEPFNCGFYNQNAGLAVGMLMENQMSENKNMVSVHNQNAVLLGTGVVRPSQQQQQQQQPLFPKPATVTFASSMNSVNNPQLTNNMVLASKPPLHEALIQGSGVGAIGLGSRGVTVASRSPTSTISSDVITKNSIRTSSYSPVPVPYSFGRGRRSNGALEKVVERRQRRMIKNRESAARSRARKQAYTMELEAEIAKLKEVNQELQNTQREIMETQKDKVLEKMKCQWGDKRLCLRRTLTGPW 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8627343 8630739 - Carg26405-RA Car11g01097 157050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01097 389 Pfam bZIP transcription factor 311 362 IPR004827 GO:0003700|GO:0006355
Car11g01097 389 Coils Coil 330 364 - -
Car11g01097 389 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 314 329 IPR004827 GO:0003700|GO:0006355
Car11g01097 389 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 309 353 IPR004827 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01097 Car19g00453 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01097 Car-Chr11:8627343 Car15g00504 Car-Chr15:2749471 8.24E-45 dispersed
Car11g01097 Car-Chr11:8627343 Car12g00510 Car-Chr12:3385224 1.54E-79 wgd
Car11g01097 Car-Chr11:8627343 Car19g00453 Car-Chr19:6249930 0 wgd
Car11g01097 Car-Chr11:8627343 Car05g00153 Car-Chr5:769103 1.00E-118 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4312 PF00170 bZIP_1 7.30E-11 CL0018 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01097 K14432 - csv:101203950 595.504