Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01101 ATGGCTCAGGTTCCATCTCCACCTCAAGTTCCCGGTACCGATCCAGCGGCCAATGGACAGCATGTCACGACGTCGTTGTATGTTGGAGATCTTGACGTGAATGTCACCGATTCGCAGCTCTATGATCTTTTTAATCAGGTGGGGCAGGTTGTTTCTGTTAGGGTTTGCAGGGATTTGACGACCCGCCGATCGCTTGGTTATGGCTATGTCAATTACAGCAGCCCTGTGGATGCAACAAGGGCATTAGATGCGCTAAACTTCACCCCTTTGAATGGAAATCCTATAAGGGTTATGTTTTCGCATCGTGACCCTAGCGTGCGGAAAAGTGGGTCTGGAAATATTTTTATCAAGAATTTGGACAAGGCAATTGATCACAAAGCATTGCATGATACATTTTCTGCATTTGGAAGCATTTTATCCTGCAAGGTTGCTACGGATGCATCCGGGCAGTCTAAAGGCTTTGGTTTTGTGCAATTTGATAAGGAGGAATCTGCCTTAAAAGCCATAGAGAAGTTGAATGGAATGCTGCTAAATGACAAGCAGGTGTTTGTGGGACCTTTCGTTCGCAAGCAAGAACGAGAAAGTGTCAGTGAGAAAACAAAGTTTAATAATGTTTTTGTTAAGAATCTGTCGGAAACTACATCTGATGAAGATTTACAGAATATGTTTGAGGAGTTTGGACCAATAACCAGTGTTGTGGTGATGAGGGATGGGGATGGAAAATCCAAATGCTTTGGCTTTGTAAACTTTGAGAATGCAGACGATGCTGCAAGGTCTGTTGAAGCACTTAATGGAAAGAAGGTTGATGGGAAAGAGTGGTATGTTGGAAAAGCCCAGAAGAAATCCGAAAGGGAAGTTGAATTGAAAAATCGGTTTGAGCAGAGTGTAAAAGAAGCTGCTGACAAGTATCAAGGTACAAACCTATATGTTAAGAATTTAGATGATAGCATTGACGATGATAAACTGAAGGAGTTATTCTCTGCGTTTGGAACCATTACCTCATACAAGGTTGTTATGCGAGACCCTAATGGAATGAGCAGAGGTTCTGGATTTGTTGCGTTCTCAACTCCTGAAGAAGCTGCAAGAGCTCTTGGAGAGATGAATGGAAGAATAATTGTGAGCAAACCTCTCTATGTTGCACTCGCGCAGAGGAAGGAAGATAGGAGAGCAAGGTTGCAGGCACAGTTTTCCCAATTGCAGCCAATGGCAATGGCATCTTCAGTTGCACCTCGTGGCATGCCAATGTATCCTCCAGGTGCTCCGGGTATCGGACAACAAATATTCTATGGACAAGCTCCGCCTGCTATTATTTCCTCACAGCCTGGCTTTGGTTATCAGCAGCAACTCATGCCTGGAATGAGGCCTGGTGGAGGTCCCATGCCAAATTTCTTTGTACCAATGGTTCAGCCGGGCCAGCAAGGGCAAAGATCTGGTGGCAGACGTGCTGGTGCCATTCAGCAAACCCAGCAGCCCGGTCCAATGATGCAGCAGCAGATGCTCCCACGAGGACGTGTGTACCGTTATCCTCCTGGACGTGGAATGCCTGATCTTCCCATGCCTGGAGTTGCGGGAGGTATGTTCTCTGTTCCATACGAGATGGGTGGTATGCCCCCACGGGATACTGTTCACCCTCAACCAATTCCTGTTGGTGCTTTGGCTTCTGCCCTCGCAAATGCAGCTCCAGACCATCAACGAACGATGCTGGGGGAAAATCTGTATCCACTCGTGGAACAGCTAGAGGTTGATAATGCAGCAAAGGTGACCGGAATGCTACTGGAAATGGACCAAACTGAGGTTCTGCACTTGCTCGAGTCGCCGGAGGCTCTGAAAGCCAAGGTGGCGGAGGCTATGGAGGTTTTGAGAACTGTGGGTCAGCAGACGGGCAATGCAGCAGCTGATCAATTGGCTTCACTGTCCCTGAGTGACAACCTTGATGCCTAA 1941 47.19 MAQVPSPPQVPGTDPAANGQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPVDATRALDALNFTPLNGNPIRVMFSHRDPSVRKSGSGNIFIKNLDKAIDHKALHDTFSAFGSILSCKVATDASGQSKGFGFVQFDKEESALKAIEKLNGMLLNDKQVFVGPFVRKQERESVSEKTKFNNVFVKNLSETTSDEDLQNMFEEFGPITSVVVMRDGDGKSKCFGFVNFENADDAARSVEALNGKKVDGKEWYVGKAQKKSEREVELKNRFEQSVKEAADKYQGTNLYVKNLDDSIDDDKLKELFSAFGTITSYKVVMRDPNGMSRGSGFVAFSTPEEAARALGEMNGRIIVSKPLYVALAQRKEDRRARLQAQFSQLQPMAMASSVAPRGMPMYPPGAPGIGQQIFYGQAPPAIISSQPGFGYQQQLMPGMRPGGGPMPNFFVPMVQPGQQGQRSGGRRAGAIQQTQQPGPMMQQQMLPRGRVYRYPPGRGMPDLPMPGVAGGMFSVPYEMGGMPPRDTVHPQPIPVGALASALANAAPDHQRTMLGENLYPLVEQLEVDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRTVGQQTGNAAADQLASLSLSDNLDA 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8668681 8673185 - Carg26401-RA Car11g01101 157054

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01101 646 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 548 625 IPR002004 GO:0003723
Car11g01101 646 Pfam Poly-adenylate binding protein, unique domain 556 620 IPR002004 GO:0003723
Car11g01101 646 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 205 273 IPR000504 GO:0003723
Car11g01101 646 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 308 377 IPR000504 GO:0003723
Car11g01101 646 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 26 96 IPR000504 GO:0003723
Car11g01101 646 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 114 181 IPR000504 GO:0003723
Car11g01101 646 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 203 280 IPR000504 GO:0003723
Car11g01101 646 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 112 184 IPR000504 GO:0003723
Car11g01101 646 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 306 384 IPR000504 GO:0003723
Car11g01101 646 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 24 102 IPR000504 GO:0003723
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01101 K13126 PABPC; polyadenylate-binding protein - csv:101223017 1101.66
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01101 Car-Chr11:8668681 Car15g00530 Car-Chr15:2873752 0 dispersed
Car14g01347 Car-Chr14:11367644 Car11g01101 Car-Chr11:8668681 9.40E-16 dispersed
Car16g00021 Car-Chr16:220404 Car11g01101 Car-Chr11:8668681 2.37E-08 dispersed
Car11g01101 Car-Chr11:8668681 Car16g00315 Car-Chr16:1929225 4.71E-42 wgd
Car11g01101 Car-Chr11:8668681 Car19g00450 Car-Chr19:6228990 0 wgd
Car11g01101 Car-Chr11:8668681 Car04g00450 Car-Chr4:2548265 0 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Car12g01070 . 67 790 Eukaryotic Initiation Factors Gene Family AT3G02270 56.8 4.6e-185 645.2
Car05g01106 . 1 724 Eukaryotic Initiation Factors Gene Family AT3G02270 56.1 2.3e-184 642.9
Car11g01523 CST 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 88.5 2.4e-54 208.4
Car11g01522 . 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 88.5 3.2e-54 208.0
Car19g00721 CST 1 111 Eukaryotic Initiation Factors Gene Family AT4G27130 88.3 7.8e-53 203.4
Car16g00540 CCT 96 207 Eukaryotic Initiation Factors Gene Family AT4G27130 77.0 2.1e-45 178.7
Car09g00869 CCT 27 131 Eukaryotic Initiation Factors Gene Family AT4G27130 81.1 3.9e-44 174.5
Car11g01523 CST 1 113 Eukaryotic Initiation Factors Gene Family AT5G54760 87.6 5.4e-54 207.2
Car11g01522 . 1 113 Eukaryotic Initiation Factors Gene Family AT5G54760 87.6 7.1e-54 206.8
Car19g00721 CST 1 111 Eukaryotic Initiation Factors Gene Family AT5G54760 87.4 1.7e-52 202.2
Car16g00540 CCT 96 207 Eukaryotic Initiation Factors Gene Family AT5G54760 77.0 2.1e-45 178.7
Car09g00869 CCT 27 131 Eukaryotic Initiation Factors Gene Family AT5G54760 81.1 3.9e-44 174.5
Car16g00540 CCT 96 207 Eukaryotic Initiation Factors Gene Family AT5G54940 85.7 7.7e-53 203.4
Car09g00869 CCT 27 131 Eukaryotic Initiation Factors Gene Family AT5G54940 84.8 2.6e-48 188.3
Car11g01522 . 1 113 Eukaryotic Initiation Factors Gene Family AT5G54940 73.5 2.5e-43 171.8
Car11g01523 CST 1 113 Eukaryotic Initiation Factors Gene Family AT5G54940 72.6 5.6e-43 170.6
Car19g00721 CST 1 111 Eukaryotic Initiation Factors Gene Family AT5G54940 73.0 8.0e-42 166.8
Car11g01523 CST 1 113 Eukaryotic Initiation Factors Gene Family AT1G54290 88.5 6.4e-55 210.3
Car11g01522 . 1 113 Eukaryotic Initiation Factors Gene Family AT1G54290 88.5 8.3e-55 209.9
Car19g00721 CST 1 111 Eukaryotic Initiation Factors Gene Family AT1G54290 88.3 2.1e-53 205.3
Car16g00540 CCT 96 207 Eukaryotic Initiation Factors Gene Family AT1G54290 76.1 1.2e-45 179.5
Car09g00869 CCT 27 131 Eukaryotic Initiation Factors Gene Family AT1G54290 81.1 1.7e-44 175.6
Car04g00131 . 1 225 Eukaryotic Initiation Factors Gene Family AT2G40290 88.4 1.4e-115 412.9
Car04g01029 . 1 225 Eukaryotic Initiation Factors Gene Family AT2G40290 88.9 1.4e-115 412.9
Car04g00131 . 1 344 Eukaryotic Initiation Factors Gene Family AT5G05470 81.2 7.1e-158 553.9
Car04g01029 . 1 344 Eukaryotic Initiation Factors Gene Family AT5G05470 81.7 1.6e-157 552.7
Car01g00667 . 61 326 Eukaryotic Initiation Factors Gene Family AT5G20920 76.1 2.4e-108 389.0
Car14g01531 . 79 344 Eukaryotic Initiation Factors Gene Family AT5G20920 71.6 1.6e-101 366.3
Car01g00667 . 175 315 Eukaryotic Initiation Factors Gene Family AT5G01940 56.3 1.8e-38 156.8
Car14g01531 . 193 333 Eukaryotic Initiation Factors Gene Family AT5G01940 56.3 1.8e-38 156.8
Car01g00667 . 179 322 Eukaryotic Initiation Factors Gene Family AT3G07920 70.9 6.4e-56 214.2
Car14g01531 . 197 340 Eukaryotic Initiation Factors Gene Family AT3G07920 70.9 6.4e-56 214.2
Car04g00013 . 1 464 Eukaryotic Initiation Factors Gene Family AT1G04170 91.8 3.4e-248 854.4
Car04g00916 . 1 464 Eukaryotic Initiation Factors Gene Family AT1G04170 91.4 1.4e-246 849.0
Car04g00019 . 2 231 Eukaryotic Initiation Factors Gene Family AT1G04170 67.3 6.0e-91 332.0
Car04g00013 . 4 464 Eukaryotic Initiation Factors Gene Family AT4G18330 83.3 3.6e-221 764.6
Car04g00916 . 4 464 Eukaryotic Initiation Factors Gene Family AT4G18330 82.9 2.0e-219 758.8
Car04g00019 . 2 231 Eukaryotic Initiation Factors Gene Family AT4G18330 59.6 4.8e-72 269.2
Car04g00013 . 93 463 Eukaryotic Initiation Factors Gene Family AT2G18720 75.7 2.1e-163 572.4
Car04g00916 . 91 463 Eukaryotic Initiation Factors Gene Family AT2G18720 75.1 2.8e-163 572.0
Car04g00019 . 23 230 Eukaryotic Initiation Factors Gene Family AT2G18720 57.2 1.1e-69 261.2
Car11g00618 . 56 376 Eukaryotic Initiation Factors Gene Family AT2G05830 75.4 2.8e-135 478.8
Car04g02136 . 1 409 Eukaryotic Initiation Factors Gene Family AT3G07300 80.3 4.5e-175 611.3
Car15g00771 . 7 249 Eukaryotic Initiation Factors Gene Family AT3G07300 88.5 5.4e-120 428.3
Car10g00241 CST 1 647 Eukaryotic Initiation Factors Gene Family AT5G38640 61.0 8.2e-200 694.1
Car11g00227 . 1 647 Eukaryotic Initiation Factors Gene Family AT5G38640 59.9 1.7e-197 686.4
Car11g00225 CST 1 667 Eukaryotic Initiation Factors Gene Family AT5G38640 58.7 4.0e-194 675.2
Car10g00241 CST 324 647 Eukaryotic Initiation Factors Gene Family AT2G44070 76.3 1.7e-143 506.1
Car11g00227 . 324 647 Eukaryotic Initiation Factors Gene Family AT2G44070 75.1 1.0e-140 496.9
Car11g00225 CST 334 667 Eukaryotic Initiation Factors Gene Family AT2G44070 71.9 3.7e-135 478.4
Car11g00227 . 1 579 Eukaryotic Initiation Factors Gene Family AT1G48970 58.3 9.6e-169 590.9
Car10g00241 CST 1 579 Eukaryotic Initiation Factors Gene Family AT1G48970 56.4 3.5e-163 572.4
Car11g00225 CST 1 589 Eukaryotic Initiation Factors Gene Family AT1G48970 55.3 9.0e-159 557.8
Car12g01070 . 67 788 Eukaryotic Initiation Factors Gene Family AT2G34970 65.8 4.9e-241 831.2
Car05g01106 . 1 724 Eukaryotic Initiation Factors Gene Family AT2G34970 65.1 3.2e-240 828.6
Car12g01070 . 67 790 Eukaryotic Initiation Factors Gene Family AT3G02270 56.8 4.6e-185 645.2
Car05g01106 . 1 724 Eukaryotic Initiation Factors Gene Family AT3G02270 56.1 2.3e-184 642.9
Car12g01070 . 67 792 Eukaryotic Initiation Factors Gene Family AT4G18300 60.9 5.7e-210 728.0
Car05g01106 . 1 724 Eukaryotic Initiation Factors Gene Family AT4G18300 60.2 4.1e-208 721.8
Car01g00706 . 119 1071 Eukaryotic Initiation Factors Gene Family AT1G48410 82.0 0.0e+00 1558.9
Car14g01580 CST 119 984 Eukaryotic Initiation Factors Gene Family AT1G48410 77.6 0.0e+00 1380.5
Car06g01179 CST 97 958 Eukaryotic Initiation Factors Gene Family AT1G48410 75.8 0.0e+00 1354.3
Car13g00206 . 129 1010 Eukaryotic Initiation Factors Gene Family AT1G48410 57.4 3.0e-292 1001.9
Car13g00944 . 4 562 Eukaryotic Initiation Factors Gene Family AT1G48410 85.0 1.7e-282 969.5
Car11g00458 . 64 714 Eukaryotic Initiation Factors Gene Family AT1G48410 57.2 1.3e-202 704.1
Car14g01580 CST 1 984 Eukaryotic Initiation Factors Gene Family AT5G43810 82.2 0.0e+00 1649.8
Car06g01179 CST 48 958 Eukaryotic Initiation Factors Gene Family AT5G43810 85.0 0.0e+00 1604.7
Car01g00706 . 183 1071 Eukaryotic Initiation Factors Gene Family AT5G43810 75.1 0.0e+00 1358.6
Car13g00206 . 105 1010 Eukaryotic Initiation Factors Gene Family AT5G43810 55.5 6.8e-286 980.7
Car13g00944 . 4 562 Eukaryotic Initiation Factors Gene Family AT5G43810 79.3 7.0e-267 917.5
Car11g00458 . 70 715 Eukaryotic Initiation Factors Gene Family AT5G43810 60.5 8.4e-220 761.1
Car11g01048 . 1 957 Eukaryotic Initiation Factors Gene Family AT4G11420 69.7 0.0e+00 1126.3
Car10g01003 . 1 955 Eukaryotic Initiation Factors Gene Family AT4G11420 70.5 0.0e+00 1125.9
Car09g01034 . 5 740 Eukaryotic Initiation Factors Gene Family AT5G27640 73.5 0.0e+00 1122.5
Car11g00027 . 5 742 Eukaryotic Initiation Factors Gene Family AT5G27640 72.1 0.0e+00 1093.6
Car09g01034 . 9 740 Eukaryotic Initiation Factors Gene Family AT5G25780 71.9 0.0e+00 1097.4
Car11g00027 . 9 742 Eukaryotic Initiation Factors Gene Family AT5G25780 70.4 1.4e-312 1068.9
Car16g00350 . 1 936 Eukaryotic Initiation Factors Gene Family AT3G56150 69.3 0.0e+00 1162.9
Car04g00506 . 1 832 Eukaryotic Initiation Factors Gene Family AT3G56150 73.1 0.0e+00 1107.0
Car16g00350 . 39 848 Eukaryotic Initiation Factors Gene Family AT3G22860 60.3 5.4e-257 884.4
Car04g00506 . 3 860 Eukaryotic Initiation Factors Gene Family AT3G22860 57.1 1.4e-249 859.8
Car03g01320 CCT 5 560 Eukaryotic Initiation Factors Gene Family AT4G20980 78.9 8.0e-258 886.7
Car07g00045 . 5 560 Eukaryotic Initiation Factors Gene Family AT4G20980 78.8 7.5e-256 880.2
Car03g01320 CCT 5 563 Eukaryotic Initiation Factors Gene Family AT5G44320 75.9 1.2e-250 862.8
Car07g00045 . 5 563 Eukaryotic Initiation Factors Gene Family AT5G44320 75.7 5.1e-249 857.4
Car03g00034 . 3 437 Eukaryotic Initiation Factors Gene Family AT3G57290 86.2 3.9e-225 777.7
Car07g01293 . 4 437 Eukaryotic Initiation Factors Gene Family AT3G57290 85.0 4.9e-220 760.8
Car15g00136 CST 2 285 Eukaryotic Initiation Factors Gene Family AT2G39990 76.6 5.0e-128 454.5
Car04g02801 CST 469 752 Eukaryotic Initiation Factors Gene Family AT2G39990 75.6 2.5e-127 452.2
Car01g00361 . 8 288 Eukaryotic Initiation Factors Gene Family AT3G11400 70.3 3.9e-118 421.8
Car14g00736 . 4 288 Eukaryotic Initiation Factors Gene Family AT3G11400 69.4 1.1e-117 420.2
Car13g00937 . 8 228 Eukaryotic Initiation Factors Gene Family AT3G11400 63.1 1.8e-78 290.0
Car01g00361 . 9 286 Eukaryotic Initiation Factors Gene Family AT5G06000 68.9 1.0e-107 387.1
Car14g00736 . 2 286 Eukaryotic Initiation Factors Gene Family AT5G06000 67.4 3.9e-107 385.2
Car13g00937 . 9 229 Eukaryotic Initiation Factors Gene Family AT5G06000 61.4 7.0e-72 268.1
Car06g01395 . 1 250 Eukaryotic Initiation Factors Gene Family AT1G10840 84.0 1.0e-121 433.3
Car14g01317 . 84 333 Eukaryotic Initiation Factors Gene Family AT1G10840 81.6 2.4e-118 422.2
Car14g00517 . 1 247 Eukaryotic Initiation Factors Gene Family AT2G46280 67.5 1.0e-92 337.0
Car11g00997 . 1 247 Eukaryotic Initiation Factors Gene Family AT2G46280 66.3 1.5e-91 333.2
Car14g00517 . 1 326 Eukaryotic Initiation Factors Gene Family AT2G46290 81.4 1.0e-159 560.1
Car11g00997 . 1 326 Eukaryotic Initiation Factors Gene Family AT2G46290 80.8 1.5e-158 556.2
Car11g00633 CST 1 232 Eukaryotic Initiation Factors Gene Family AT4G33250 75.9 2.4e-98 355.5
Car10g00715 CST 1 232 Eukaryotic Initiation Factors Gene Family AT4G33250 75.0 1.6e-97 352.8
Car14g01103 CST 1 391 Eukaryotic Initiation Factors Gene Family AT3G13920 93.4 3.7e-209 724.5
Car14g00879 . 38 388 Eukaryotic Initiation Factors Gene Family AT3G13920 67.5 7.9e-135 477.6
Car01g00230 . 33 176 Eukaryotic Initiation Factors Gene Family AT3G13920 53.1 4.0e-46 183.0
Car14g01103 CST 1 413 Eukaryotic Initiation Factors Gene Family AT1G72730 89.4 2.0e-215 745.3
Car14g00879 . 38 410 Eukaryotic Initiation Factors Gene Family AT1G72730 64.9 1.1e-139 493.8
Car01g00230 . 33 176 Eukaryotic Initiation Factors Gene Family AT1G72730 52.6 7.5e-45 178.7
Car14g00879 . 14 410 Eukaryotic Initiation Factors Gene Family AT3G19760 88.2 1.6e-201 699.1
Car14g01103 CST 37 413 Eukaryotic Initiation Factors Gene Family AT3G19760 63.9 6.7e-139 491.1
Car01g00230 . 33 176 Eukaryotic Initiation Factors Gene Family AT3G19760 64.9 2.8e-60 229.9
Car05g00327 CCT,ECH 1 427 Eukaryotic Initiation Factors Gene Family AT5G11200 86.1 1.3e-226 782.7
Car12g00317 CCT,ECH 1 430 Eukaryotic Initiation Factors Gene Family AT5G11200 83.9 2.1e-216 748.8
Car05g00327 CCT,ECH 84 427 Eukaryotic Initiation Factors Gene Family AT5G11170 95.3 7.1e-190 660.2
Car12g00317 CCT,ECH 71 430 Eukaryotic Initiation Factors Gene Family AT5G11170 90.3 2.0e-184 642.1
Car05g00036 . 1 517 Eukaryotic Initiation Factors Gene Family AT3G26400 51.4 1.7e-105 380.6
Car12g00031 . 1 519 Eukaryotic Initiation Factors Gene Family AT3G26400 50.2 3.4e-98 356.3
Car05g00036 . 1 517 Eukaryotic Initiation Factors Gene Family AT1G13020 53.2 1.2e-114 411.0
Car12g00031 . 1 519 Eukaryotic Initiation Factors Gene Family AT1G13020 51.9 2.7e-111 399.8
Car13g00454 CST 1 234 Eukaryotic Initiation Factors Gene Family AT4G18040 68.5 9.4e-93 337.0
Car18g00418 CST 1 234 Eukaryotic Initiation Factors Gene Family AT4G18040 68.2 7.9e-92 334.0
Car08g00939 CST 22 198 Eukaryotic Initiation Factors Gene Family AT4G18040 54.5 2.0e-58 223.0
Car18g00418 CST 48 235 Eukaryotic Initiation Factors Gene Family AT1G29590 64.9 6.9e-75 277.7
Car13g00454 CST 48 235 Eukaryotic Initiation Factors Gene Family AT1G29590 63.8 2.6e-74 275.8
Car08g00939 CST 21 199 Eukaryotic Initiation Factors Gene Family AT1G29590 53.3 1.2e-55 213.8
Car18g00418 CST 48 235 Eukaryotic Initiation Factors Gene Family AT1G29550 64.4 2.6e-74 275.8
Car13g00454 CST 48 235 Eukaryotic Initiation Factors Gene Family AT1G29550 63.3 9.9e-74 273.9
Car08g00939 CST 21 199 Eukaryotic Initiation Factors Gene Family AT1G29550 52.8 1.6e-55 213.4
Car08g00939 CST 1 191 Eukaryotic Initiation Factors Gene Family AT5G35620 66.0 1.9e-70 262.7
Car17g00127 CST 10 236 Eukaryotic Initiation Factors Gene Family AT5G35620 55.4 1.2e-64 243.4
Car18g00418 CST 58 235 Eukaryotic Initiation Factors Gene Family AT5G35620 55.2 1.8e-52 203.0
Car13g00454 CST 58 235 Eukaryotic Initiation Factors Gene Family AT5G35620 54.6 5.2e-52 201.4
Car14g00984 . 55 232 Eukaryotic Initiation Factors Gene Family AT5G18110 86.0 1.7e-91 332.8
Car10g00422 . 1 813 Eukaryotic Initiation Factors Gene Family AT5G57870 62.4 4.8e-271 931.0
Car02g00864 . 1 807 Eukaryotic Initiation Factors Gene Family AT5G57870 60.7 8.0e-258 887.1
Car09g00352 CCT 2 765 Eukaryotic Initiation Factors Gene Family AT5G57870 59.8 3.0e-249 858.6
Car01g01290 CCT 2 766 Eukaryotic Initiation Factors Gene Family AT5G57870 57.3 6.4e-239 824.3
Car10g00422 . 2 813 Eukaryotic Initiation Factors Gene Family AT2G24050 54.0 2.3e-225 779.2
Car09g00352 CCT 2 766 Eukaryotic Initiation Factors Gene Family AT2G24050 56.0 2.5e-224 775.8
Car01g01290 CCT 2 767 Eukaryotic Initiation Factors Gene Family AT2G24050 53.8 4.1e-219 758.4
Car02g00864 . 2 807 Eukaryotic Initiation Factors Gene Family AT2G24050 53.3 1.3e-217 753.4
Car10g00422 . 273 463 Eukaryotic Initiation Factors Gene Family AT1G62410 52.4 5.1e-48 188.3
Car02g00864 . 267 457 Eukaryotic Initiation Factors Gene Family AT1G62410 52.4 1.1e-47 187.2
Car05g00430 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G77840 63.2 1.3e-140 496.9
Car12g00132 . 63 505 Eukaryotic Initiation Factors Gene Family AT1G77840 62.1 1.8e-137 486.5
Car12g00132 . 63 505 Eukaryotic Initiation Factors Gene Family AT1G36730 67.5 3.9e-124 442.2
Car05g00430 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G36730 63.1 4.7e-122 435.3
Car01g01279 CCT,CST 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 84.3 8.9e-59 223.4
Car09g00361 CCT 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 84.3 8.9e-59 223.4
Car02g00855 . 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 81.9 4.9e-57 217.6
Car04g01724 CCT,ECH 438 564 Eukaryotic Initiation Factors Gene Family AT1G26630 81.1 1.1e-56 216.5
Car18g01034 . 56 192 Eukaryotic Initiation Factors Gene Family AT1G26630 75.9 6.0e-55 210.7
Car05g00295 CCT,CST 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 79.5 1.0e-54 209.9
Car01g01279 CCT,CST 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 86.2 1.1e-76 283.1
Car09g00361 CCT 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 86.2 1.1e-76 283.1
Car04g01724 CCT,ECH 438 596 Eukaryotic Initiation Factors Gene Family AT1G69410 84.3 1.8e-76 282.3
Car05g00295 CCT,CST 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 84.9 2.7e-75 278.5
Car02g00855 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 84.3 3.5e-75 278.1
Car18g01034 . 56 224 Eukaryotic Initiation Factors Gene Family AT1G69410 78.7 1.1e-73 273.1
Car10g00432 . 1 151 Eukaryotic Initiation Factors Gene Family AT1G69410 58.0 1.9e-41 166.0
Car01g01279 CCT,CST 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 91.2 8.8e-79 290.0
Car09g00361 CCT 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 91.2 8.8e-79 290.0
Car04g01724 CCT,ECH 438 596 Eukaryotic Initiation Factors Gene Family AT1G13950 87.4 8.3e-77 283.5
Car02g00855 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 87.4 3.1e-76 281.6
Car05g00295 CCT,CST 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 88.1 3.5e-75 278.1
Car18g01034 . 56 224 Eukaryotic Initiation Factors Gene Family AT1G13950 81.7 6.6e-74 273.9
Car10g00432 . 1 151 Eukaryotic Initiation Factors Gene Family AT1G13950 59.3 1.9e-41 166.0
Car09g00978 . 333 1351 Eukaryotic Initiation Factors Gene Family AT1G76810 68.4 0.0e+00 1140.6
Car01g00890 . 330 1366 Eukaryotic Initiation Factors Gene Family AT1G76810 67.2 0.0e+00 1110.5
Car09g00978 . 467 1351 Eukaryotic Initiation Factors Gene Family AT1G21160 59.9 3.6e-264 908.7
Car01g00890 . 551 1366 Eukaryotic Initiation Factors Gene Family AT1G21160 58.7 4.6e-259 891.7
Car02g00473 . 1 245 Eukaryotic Initiation Factors Gene Family AT3G55620 87.3 7.4e-125 443.7
Car20g00907 . 1 211 Eukaryotic Initiation Factors Gene Family AT3G55620 87.2 3.1e-107 385.2
Car02g00473 . 1 245 Eukaryotic Initiation Factors Gene Family AT2G39820 68.0 3.1e-94 342.0
Car20g00907 . 1 211 Eukaryotic Initiation Factors Gene Family AT2G39820 69.0 6.0e-82 301.2
Car19g00450 . 5 648 Eukaryotic Initiation Factors Gene Family AT2G23350 58.9 1.7e-200 696.4
Car11g01101 . 25 644 Eukaryotic Initiation Factors Gene Family AT2G23350 59.5 1.1e-194 677.2
Car04g00450 . 15 662 Eukaryotic Initiation Factors Gene Family AT2G23350 57.2 2.0e-193 672.9
Car16g00315 . 15 397 Eukaryotic Initiation Factors Gene Family AT2G23350 66.6 2.9e-147 519.6
Car04g02381 . 35 636 Eukaryotic Initiation Factors Gene Family AT2G23350 51.1 8.1e-142 501.5
Car19g00450 . 1 645 Eukaryotic Initiation Factors Gene Family AT4G34110 69.4 4.7e-248 854.4
Car04g00450 . 3 659 Eukaryotic Initiation Factors Gene Family AT4G34110 68.6 2.0e-243 839.0
Car11g01101 . 20 641 Eukaryotic Initiation Factors Gene Family AT4G34110 70.1 1.3e-242 836.3
Car15g00530 . 27 656 Eukaryotic Initiation Factors Gene Family AT4G34110 53.4 1.3e-168 590.5
Car04g02381 . 20 655 Eukaryotic Initiation Factors Gene Family AT4G34110 54.2 1.5e-166 583.6
Car16g00315 . 18 397 Eukaryotic Initiation Factors Gene Family AT4G34110 73.9 4.6e-163 572.0
Car15g00530 . 1 645 Eukaryotic Initiation Factors Gene Family AT1G22760 56.0 4.8e-187 651.7
Car04g02381 . 1 636 Eukaryotic Initiation Factors Gene Family AT1G22760 56.7 2.8e-179 625.9
Car19g00450 . 25 633 Eukaryotic Initiation Factors Gene Family AT1G22760 53.6 3.7e-163 572.4
Car04g00450 . 3 634 Eukaryotic Initiation Factors Gene Family AT1G22760 52.8 1.6e-161 567.0
Car11g01101 . 3 621 Eukaryotic Initiation Factors Gene Family AT1G22760 53.2 1.6e-161 567.0
Car16g00315 . 29 397 Eukaryotic Initiation Factors Gene Family AT1G22760 62.8 7.8e-129 458.4
Car15g00530 . 3 640 Eukaryotic Initiation Factors Gene Family AT1G71770 55.1 1.5e-183 640.2
Car04g02381 . 33 655 Eukaryotic Initiation Factors Gene Family AT1G71770 55.8 6.1e-177 618.2
Car19g00450 . 25 643 Eukaryotic Initiation Factors Gene Family AT1G71770 53.6 1.1e-165 580.9
Car11g01101 . 21 642 Eukaryotic Initiation Factors Gene Family AT1G71770 52.8 8.5e-163 571.2
Car04g00450 . 29 637 Eukaryotic Initiation Factors Gene Family AT1G71770 53.2 9.8e-159 557.8
Car16g00315 . 29 397 Eukaryotic Initiation Factors Gene Family AT1G71770 59.2 1.6e-121 434.1
Car19g00450 . 24 648 Eukaryotic Initiation Factors Gene Family AT1G49760 72.3 1.4e-250 862.8
Car11g01101 . 20 644 Eukaryotic Initiation Factors Gene Family AT1G49760 70.9 1.8e-245 845.9
Car04g00450 . 28 663 Eukaryotic Initiation Factors Gene Family AT1G49760 70.7 7.4e-244 840.5
Car15g00530 . 34 655 Eukaryotic Initiation Factors Gene Family AT1G49760 53.3 1.1e-165 580.9
Car16g00315 . 3 397 Eukaryotic Initiation Factors Gene Family AT1G49760 72.0 4.0e-165 578.9
Car04g02381 . 33 654 Eukaryotic Initiation Factors Gene Family AT1G49760 54.4 7.9e-161 564.7
Car04g02381 . 92 405 Eukaryotic Initiation Factors Gene Family AT1G34140 55.6 3.4e-90 329.3
Car16g00315 . 87 397 Eukaryotic Initiation Factors Gene Family AT1G34140 54.6 3.7e-89 325.9
Car04g01944 . 1 422 Eukaryotic Initiation Factors Gene Family AT1G57720 72.3 8.8e-171 597.0
Car06g00742 . 1 414 Eukaryotic Initiation Factors Gene Family AT1G57720 72.9 1.7e-169 592.8
Car04g00833 . 1 412 Eukaryotic Initiation Factors Gene Family AT1G57720 76.8 1.4e-163 573.2
Car16g00797 . 1 417 Eukaryotic Initiation Factors Gene Family AT1G57720 73.8 8.3e-161 563.9
Car11g00679 . 1 1030 Eukaryotic Initiation Factors Gene Family AT3G22980 70.6 0.0e+00 1424.5
Car17g01283 . 1 434 Eukaryotic Initiation Factors Gene Family AT5G47880 88.0 1.3e-220 762.7
Car08g00025 . 1 434 Eukaryotic Initiation Factors Gene Family AT5G47880 87.8 3.7e-220 761.1
Car17g01283 . 6 436 Eukaryotic Initiation Factors Gene Family AT1G12920 89.6 1.0e-225 779.6
Car08g00025 . 6 436 Eukaryotic Initiation Factors Gene Family AT1G12920 89.3 1.7e-225 778.9
Car17g01283 . 1 436 Eukaryotic Initiation Factors Gene Family AT3G26618 90.6 3.4e-229 791.2
Car08g00025 . 1 436 Eukaryotic Initiation Factors Gene Family AT3G26618 90.4 1.7e-228 788.9
Car09g00448 . 20 766 Eukaryotic Initiation Factors Gene Family AT5G10630 53.2 3.5e-201 698.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001217 4 2 2 3 3 2 3 2 2 2 2 2 4 2 2 4 2 6 4 2 2 2 2 2 2 2 2 3 2 3 77
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Car11g01101 Car_Chr11 FPKM 26.85108 30.249071 31.825945 29.947325 22.105639 23.607681 24.736429 31.670744 30.463772 30.363113