Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g01110 | ATGGATCCAAAATCTACTGATTCCCCACCGTCACCTACTGTTCATTCCTCGGCTACTAAATTTCCAGAAGTACATCCTCAGGCTCCTGCTTCCTCTGGAATGGATAATCTGGCACGTGAGGCACCATCTAAGCTATCTTCTTCTGGCATAACTTCATGGGCTAAGAACTTGAAAATTTCTCAACCACAGTCAGCTTCACCAGATGCCACGACTGAAAATGCTGGGAAGTCAGCGTTTGCTCGTTTTACTAGTGGCTTTGGCTTGAATTTATCTCCAAAATCTGCTGCACCTAATGATTCCCCAGATGCCTCTTCTAAACCTGCCCAACCCAGTTTGGTTGGATCAATTACAAGAGGGTTGGTTGACTCTTCAAAGAGTGCTGTAAAGGCTGTTCAAGTTAAAGCGCGTCATGTTGTCTCCCAAAACAAGCGAAGATACCAGGAAGGTGGATTTGATTTGGACATGACTTATATTACTGAAAATATCATTGCAATGGGCTTCCCTGCGGGTGACATGAGCTCAGGGTTTTTTGGATATGTTGAGGGTTTCTACAGAAACCATATGGAAGAAGTCATTAAGTTCTTTGAAACACATCACAAGGGAAAATACAAAGTATACAATCTTTGTTCCGAGAGGCTATATGATGCGTCATTATTTGAAGGAAAGGTGGCTTGTTTTCCTTTTGATGACCATAACTGTCCCCCGGTTCAACTGATAATATCATTTTGCCAAAGTGCGTATTCATGGTTGAAGGATGATATCGAAAATGTTGTGGTTGTGCATTGCAAGGCAGGAATGGCCCGGACAGGCTTGATGATTTCCAGTCTTCTTCTATTTCTGAAGTTCTTTCCAACGGCTGAAGAATCTATTGAATACTACAACCAGAGAAGGTGTTTCGATGGCAAAGGCCTGGTCTTACCAAGTCAGATTAGGTATGTCAAATATTTCGAGCGTATTTTAACCTACTTCAATGGAGAAAATCCTCCTGGCCGCAGTTGTGTACTTAGAGGGTTTCGTCTCCACAGATGTCCATATTGGATCAGGCCTTCCATTACTGTATCTGACCATAATGGTGTTCTGTTCTCCACTAAAACACATCAAAGAACCAAGAATCTGTCGCCAGAAGATTTTTGGTTTACTGCACCAAAGAAGGGGATAATGGTATTCGCCTTACCCGGGGAGCCTGGTCTAGCTGAGTTGTGCGGGGACTTCAAGGTTCATTTCCATGATCGCCAAGGAGATTTCTATTGTTGGCTAAACACAACCATGACCGAAAATCGGAAAATGCTCTACACTAATGATCTTGATGGGTTCGACAAGAGAAAACTGCCTTCCCCTGGATTTCAGGTCGAGGTTGTTCTAGTAGATATGTTGCCGAACGTGGACAATACGACCAAGAAATCAGATGAAAGCTCGGGCTCGAAATCTTCTGCAGTTGATGGGAGTGAAGTTTCTGATAACCAAAACAGAAAATCATTAACTAATGAGAAAGATGATGTATTTTCTGACAGTGAATCAGAAGGTGGTTCTGCAAAGAGCAAGGATGCAGCATCAGGTTCAGGGTCTGAAGCATCAGCTGTCAAGACGACATCTAAATCTCAAACGAGTGCGACTTCATCCGACGATGTTGCGAGTTTATCACATGCGACAAAGCAAGTTTCCCTGGGAGATGGTGGAGCTAAACAGGCTGCTCCAGCAGCCAGTGACCGAAAAGGTGATGGAGTCAAAAGATCTGATTCCCTCTCAGAAATTCCAAATTCAGAAAGTGAATTCAAGGCAATGGCTGCTGATGCTTCTGTTTTCACATTTGGGGACGACGAAGACTACGAGAGTGAGTGA | 1839 | 43.61 | MDPKSTDSPPSPTVHSSATKFPEVHPQAPASSGMDNLAREAPSKLSSSGITSWAKNLKISQPQSASPDATTENAGKSAFARFTSGFGLNLSPKSAAPNDSPDASSKPAQPSLVGSITRGLVDSSKSAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPVQLIISFCQSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIEYYNQRRCFDGKGLVLPSQIRYVKYFERILTYFNGENPPGRSCVLRGFRLHRCPYWIRPSITVSDHNGVLFSTKTHQRTKNLSPEDFWFTAPKKGIMVFALPGEPGLAELCGDFKVHFHDRQGDFYCWLNTTMTENRKMLYTNDLDGFDKRKLPSPGFQVEVVLVDMLPNVDNTTKKSDESSGSKSSAVDGSEVSDNQNRKSLTNEKDDVFSDSESEGGSAKSKDAASGSGSEASAVKTTSKSQTSATSSDDVASLSHATKQVSLGDGGAKQAAPAASDRKGDGVKRSDSLSEIPNSESEFKAMAADASVFTFGDDEDYESE | 612 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8814536 | 8820532 | + | Carg26849-RA | Car11g01110 | 157063 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g01110 | 612 | MobiDBLite | consensus disorder prediction | 511 | 552 | - | - | |
Car11g01110 | 612 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Car11g01110 | 612 | ProSiteProfiles | C2 tensin-type domain profile. | 330 | 457 | IPR014020 | - | |
Car11g01110 | 612 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 258 | 297 | IPR000387 | GO:0016311|GO:0016791 | |
Car11g01110 | 612 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 144 | 323 | IPR029023 | - | |
Car11g01110 | 612 | MobiDBLite | consensus disorder prediction | 462 | 597 | - | - | |
Car11g01110 | 612 | MobiDBLite | consensus disorder prediction | 462 | 489 | - | - | |
Car11g01110 | 612 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 260 | 270 | IPR016130 | GO:0016311|GO:0016791 | |
Car11g01110 | 612 | MobiDBLite | consensus disorder prediction | 90 | 111 | - | - | |
Car11g01110 | 612 | MobiDBLite | consensus disorder prediction | 490 | 510 | - | - | |
Car11g01110 | 612 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car07g00682 | Car-Chr7:3482492 | Car11g01110 | Car-Chr11:8814536 | 0 | dispersed | |
Car11g01110 | Car-Chr11:8814536 | Car12g00563 | Car-Chr12:3766505 | 0 | dispersed | |
Car11g01110 | Car-Chr11:8814536 | Car09g00362 | Car-Chr9:1972665 | 4.68E-07 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g01110 | K01110 | - | csv:101222304 | 1055.82 |