Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01110 ATGGATCCAAAATCTACTGATTCCCCACCGTCACCTACTGTTCATTCCTCGGCTACTAAATTTCCAGAAGTACATCCTCAGGCTCCTGCTTCCTCTGGAATGGATAATCTGGCACGTGAGGCACCATCTAAGCTATCTTCTTCTGGCATAACTTCATGGGCTAAGAACTTGAAAATTTCTCAACCACAGTCAGCTTCACCAGATGCCACGACTGAAAATGCTGGGAAGTCAGCGTTTGCTCGTTTTACTAGTGGCTTTGGCTTGAATTTATCTCCAAAATCTGCTGCACCTAATGATTCCCCAGATGCCTCTTCTAAACCTGCCCAACCCAGTTTGGTTGGATCAATTACAAGAGGGTTGGTTGACTCTTCAAAGAGTGCTGTAAAGGCTGTTCAAGTTAAAGCGCGTCATGTTGTCTCCCAAAACAAGCGAAGATACCAGGAAGGTGGATTTGATTTGGACATGACTTATATTACTGAAAATATCATTGCAATGGGCTTCCCTGCGGGTGACATGAGCTCAGGGTTTTTTGGATATGTTGAGGGTTTCTACAGAAACCATATGGAAGAAGTCATTAAGTTCTTTGAAACACATCACAAGGGAAAATACAAAGTATACAATCTTTGTTCCGAGAGGCTATATGATGCGTCATTATTTGAAGGAAAGGTGGCTTGTTTTCCTTTTGATGACCATAACTGTCCCCCGGTTCAACTGATAATATCATTTTGCCAAAGTGCGTATTCATGGTTGAAGGATGATATCGAAAATGTTGTGGTTGTGCATTGCAAGGCAGGAATGGCCCGGACAGGCTTGATGATTTCCAGTCTTCTTCTATTTCTGAAGTTCTTTCCAACGGCTGAAGAATCTATTGAATACTACAACCAGAGAAGGTGTTTCGATGGCAAAGGCCTGGTCTTACCAAGTCAGATTAGGTATGTCAAATATTTCGAGCGTATTTTAACCTACTTCAATGGAGAAAATCCTCCTGGCCGCAGTTGTGTACTTAGAGGGTTTCGTCTCCACAGATGTCCATATTGGATCAGGCCTTCCATTACTGTATCTGACCATAATGGTGTTCTGTTCTCCACTAAAACACATCAAAGAACCAAGAATCTGTCGCCAGAAGATTTTTGGTTTACTGCACCAAAGAAGGGGATAATGGTATTCGCCTTACCCGGGGAGCCTGGTCTAGCTGAGTTGTGCGGGGACTTCAAGGTTCATTTCCATGATCGCCAAGGAGATTTCTATTGTTGGCTAAACACAACCATGACCGAAAATCGGAAAATGCTCTACACTAATGATCTTGATGGGTTCGACAAGAGAAAACTGCCTTCCCCTGGATTTCAGGTCGAGGTTGTTCTAGTAGATATGTTGCCGAACGTGGACAATACGACCAAGAAATCAGATGAAAGCTCGGGCTCGAAATCTTCTGCAGTTGATGGGAGTGAAGTTTCTGATAACCAAAACAGAAAATCATTAACTAATGAGAAAGATGATGTATTTTCTGACAGTGAATCAGAAGGTGGTTCTGCAAAGAGCAAGGATGCAGCATCAGGTTCAGGGTCTGAAGCATCAGCTGTCAAGACGACATCTAAATCTCAAACGAGTGCGACTTCATCCGACGATGTTGCGAGTTTATCACATGCGACAAAGCAAGTTTCCCTGGGAGATGGTGGAGCTAAACAGGCTGCTCCAGCAGCCAGTGACCGAAAAGGTGATGGAGTCAAAAGATCTGATTCCCTCTCAGAAATTCCAAATTCAGAAAGTGAATTCAAGGCAATGGCTGCTGATGCTTCTGTTTTCACATTTGGGGACGACGAAGACTACGAGAGTGAGTGA 1839 43.61 MDPKSTDSPPSPTVHSSATKFPEVHPQAPASSGMDNLAREAPSKLSSSGITSWAKNLKISQPQSASPDATTENAGKSAFARFTSGFGLNLSPKSAAPNDSPDASSKPAQPSLVGSITRGLVDSSKSAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPVQLIISFCQSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIEYYNQRRCFDGKGLVLPSQIRYVKYFERILTYFNGENPPGRSCVLRGFRLHRCPYWIRPSITVSDHNGVLFSTKTHQRTKNLSPEDFWFTAPKKGIMVFALPGEPGLAELCGDFKVHFHDRQGDFYCWLNTTMTENRKMLYTNDLDGFDKRKLPSPGFQVEVVLVDMLPNVDNTTKKSDESSGSKSSAVDGSEVSDNQNRKSLTNEKDDVFSDSESEGGSAKSKDAASGSGSEASAVKTTSKSQTSATSSDDVASLSHATKQVSLGDGGAKQAAPAASDRKGDGVKRSDSLSEIPNSESEFKAMAADASVFTFGDDEDYESE 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8814536 8820532 + Carg26849-RA Car11g01110 157063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01110 612 MobiDBLite consensus disorder prediction 511 552 - -
Car11g01110 612 MobiDBLite consensus disorder prediction 1 20 - -
Car11g01110 612 ProSiteProfiles C2 tensin-type domain profile. 330 457 IPR014020 -
Car11g01110 612 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 258 297 IPR000387 GO:0016311|GO:0016791
Car11g01110 612 ProSiteProfiles Phosphatase tensin-type domain profile. 144 323 IPR029023 -
Car11g01110 612 MobiDBLite consensus disorder prediction 462 597 - -
Car11g01110 612 MobiDBLite consensus disorder prediction 462 489 - -
Car11g01110 612 ProSitePatterns Tyrosine specific protein phosphatases active site. 260 270 IPR016130 GO:0016311|GO:0016791
Car11g01110 612 MobiDBLite consensus disorder prediction 90 111 - -
Car11g01110 612 MobiDBLite consensus disorder prediction 490 510 - -
Car11g01110 612 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00682 Car-Chr7:3482492 Car11g01110 Car-Chr11:8814536 0 dispersed
Car11g01110 Car-Chr11:8814536 Car12g00563 Car-Chr12:3766505 0 dispersed
Car11g01110 Car-Chr11:8814536 Car09g00362 Car-Chr9:1972665 4.68E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01110 K01110 - csv:101222304 1055.82