Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01112 ATGGCTCTACACCCACATGAACACACAACCCAGCGCCACCACAACACTCTCTTCTTCCTCCACTGCACACACCAACAGCACCACCACCAACAACAACACCTGCAAACAGAGGACCCCATTTTCCACGACAATGGCGGCACCCACTTTCTGGAACAGACGACCCATTTCGTTGCTTTCGAAGATGAAGAGCTTGGTTCTTTGTTAGCCAAAGAACGAGATCAGAATCTCCAAAACGGCGACGTTTTGGAGCGCTTAATTGAAAGAGACGCAGCTCTGTCTCTGGCTAGAACAGAGGCCATCGAGTGGTTGCTTAAAGTTAATACCTTTTATGGCTTCTCCTCTGTCACCGCTCTCTTAGCCATTAATTACCTCGACCGCATCCTCTCTGGTCCTCATTTTCAAAGAGACAAGCCATGGATGCTACAGCTTCTTGCAGTAACTTGCATCTCTTTAGCAGCCAAAGTCGAAGAAATTCGTGTTCCTCTTCTTCTTGATCTCCAGGTGGAAGATTCAAAGTTCATATTCGAACCAAAAACGATACAAAGAATGGAGCTTTTGGTGCTGAGTGGTCTGAAATGGAAGATGCATCCAGTGACCCCTGTTTCGTTTCTTGGCATTGTAACGAAGCGGCTTGGGTTGAAGAATCAGTGCATTGAGAGGGAGTTTTTCCGGCGCTGTGAGCGTATTCTTCTCTCTCTCGTCTCTGATTCGAGATCAGTGGGGTTTCTTCCTTCTGTGATGGCTGTATCGGCAATGGTGAGCGTTGTTGAAGAGATGGGTGACTGTAACTGTTACTGTAACCCATTGGACTTTCAGGATCGCCTTCTTAATGCCCTCAAAATAACCAAGGAAAGATCGAAGAAATGCTGCAATGTGATAAGGGAGGTAACGAAACGGGAAACGAAAGCAAACCGATCGGGAAAGAAGAGGAAGCAGAACGAGGAGGACGAGGGGGAGGAAGAAGACGACAACGACGACGAAGAGAGATCAAGAACATCATTAGAAACCGAAACAGAATCAGAATCAGAAGGAGGAGGAAGCCCAAATGGAGTAATGGAAGGCAATTTCAGCTGTGAAAGCTCCAATGATTCGTGGGGCATAGAAGAAGTCACAGGGTGTTGTTGTTCAAAAAGAACCAAAAGCAGTGAAGAATCATGA 1158 46.63 MALHPHEHTTQRHHNTLFFLHCTHQQHHHQQQHLQTEDPIFHDNGGTHFLEQTTHFVAFEDEELGSLLAKERDQNLQNGDVLERLIERDAALSLARTEAIEWLLKVNTFYGFSSVTALLAINYLDRILSGPHFQRDKPWMLQLLAVTCISLAAKVEEIRVPLLLDLQVEDSKFIFEPKTIQRMELLVLSGLKWKMHPVTPVSFLGIVTKRLGLKNQCIEREFFRRCERILLSLVSDSRSVGFLPSVMAVSAMVSVVEEMGDCNCYCNPLDFQDRLLNALKITKERSKKCCNVIREVTKRETKANRSGKKRKQNEEDEGEEEDDNDDEERSRTSLETETESESEGGGSPNGVMEGNFSCESSNDSWGIEEVTGCCCSKRTKSSEES 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8836464 8838349 + Carg26851-RA Car11g01112 157065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01112 385 MobiDBLite consensus disorder prediction 301 315 - -
Car11g01112 385 Pfam Cyclin, N-terminal domain 74 195 IPR006671 -
Car11g01112 385 MobiDBLite consensus disorder prediction 301 364 - -
Car11g01112 385 Pfam Cyclin, C-terminal domain 198 316 IPR004367 -
Car11g01112 385 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01112 Car-Chr11:8836464 Car03g00762 Car-Chr3:6407386 7.25E-50 dispersed
Car12g00565 Car-Chr12:3777855 Car11g01112 Car-Chr11:8836464 1.45E-151 transposed
Car01g01415 Car-Chr1:12255474 Car11g01112 Car-Chr11:8836464 3.36E-72 wgd
Car11g01112 Car-Chr11:8836464 Car12g00528 Car-Chr12:3487122 1.80E-70 wgd
Car11g01112 Car-Chr11:8836464 Car16g00312 Car-Chr16:1905764 6.10E-89 wgd
Car11g01112 Car-Chr11:8836464 Car04g00447 Car-Chr4:2527708 2.35E-82 wgd
Car11g01112 Car-Chr11:8836464 Car05g00140 Car-Chr5:702502 3.91E-74 wgd
Car11g01112 Car-Chr11:8836464 Car09g00219 Car-Chr9:1082662 3.79E-73 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01112 K14505 - csv:101222066 419.853