Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car11g01119 | ATGGGTAGCGTTGAAGGAGAAAGAACAGCATCAGGGTTTGCAGCGAGAGACCCATCTGGGTTCCTCTCTCCATACACTTACCAGCTCAGAGAAACAGGGCCTGAGGATGTTCACATAAGAGTCATATGCTGTGGACTCTGCCACACTGACATTCACAACATCAAAAATGAACTCGGAATGTCCAATTACCCCATGGTTCCTGGGCATGAGGTTGTCGGAGAAGTGGTGGAAGTTGGGAAGAACGTGACGAGATTTAGAGTGAAGGATGTTGTCGGAGTTGGATGTATTGTCGGATCTTGTAAAAGCTGCGAACGATGTGAGACTGACAGAGAGCAATATTGCAATAACAGGATTTGGACTAATAATGATGTTTATTCCGACGGCCGCCCTACCCAAGGCGGCTTCGCCACCGCCATGGTCGTCGACCAAAAATTTGTGGTGAAAGTTCCAGATGGGATGGCGCCAGAGCAGGCGTCGGCGTTGCTATGCGCCGGCGTGACAGTATACAGCCCACTAAACCACTTCGGGCTGAAGAAAAGCGGGCTGAGAGGAGCGATCTTAGGCCTCGGCGGCGTTGGACACATGGGTGTGAAGATAGCAAAGGCATTGGGCCACCATGTCACAGTCATAAGCTCCTCCAACAAGAAGAGAGAAGAAGCTTTGGATCATCTCGGCGCCGACGACTACCTTATGGATTACATAAACAAAGCCATTGAAAGGTTGGAGAAGAATGATGTAAGGTATAGGTTCGTGGTGGATGTGGAAGGAAGCAAGTTTTAA | 780 | 49.49 | MGSVEGERTASGFAARDPSGFLSPYTYQLRETGPEDVHIRVICCGLCHTDIHNIKNELGMSNYPMVPGHEVVGEVVEVGKNVTRFRVKDVVGVGCIVGSCKSCERCETDREQYCNNRIWTNNDVYSDGRPTQGGFATAMVVDQKFVVKVPDGMAPEQASALLCAGVTVYSPLNHFGLKKSGLRGAILGLGGVGHMGVKIAKALGHHVTVISSSNKKREEALDHLGADDYLMDYINKAIERLEKNDVRYRFVVDVEGSKF | 259 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 8903347 | 8904869 | - | Carg26858-RA | Car11g01119 | 157072 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car11g01119 | 259 | Pfam | Alcohol dehydrogenase GroES-like domain | 35 | 149 | IPR013154 | - | |
| Car11g01119 | 259 | Pfam | Zinc-binding dehydrogenase | 191 | 247 | IPR013149 | - | |
| Car11g01119 | 259 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 68 | 82 | IPR002328 | GO:0008270|GO:0016491 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car11g01119 | Car-Chr11:8903347 | Car20g00941 | Car-Chr20:10326946 | 5.50E-53 | dispersed | |
| Car11g01119 | Car-Chr11:8903347 | Car16g00304 | Car-Chr16:1873847 | 3.48E-10 | wgd | |
| Car11g01119 | Car-Chr11:8903347 | Car04g00441 | Car-Chr4:2500572 | 5.88E-09 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car11g01119 | K00083 | - | csv:101214622 | 429.483 |