Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01150 ATGAGAGGGCAGCATTCTCACCCACCGAAGCCGGTTTTCGCCGGACCTGATGACGAAAACGAACCGTGTCGTTCTTATCTCGCCGGAACGAACGCCCCATTAGGCGCTGGGATTCGGAAGAAGGGGACCGGAGTTCGGCCATGGCTGCTTCTGGACTTGACTGGTGGAGCTCAGGTCGTTGAGGCCGGAAAACACGCGATTATGCGGCGGACTGGTTTGCCCGCGCGAGACCTCCGGATTCTCGATCCGATGCTCTCGTATCCATCTACGATTCTTGGCCGTGAGAAAGCGATTGTGATCAATTTGGAGCACATCAAAGCTATTATCACCGCTCAAGATGTGTTCGTGTTGAATGCTAGGGATCCGTCAGTAACCCCCTTCGTCGAGGAGCTTCAGAGGCGGGTTCTGCGGCACTACCAAGCCACTAAGGCCGCTCAGGAGGGCAATGGCGATGATTCCAGTTGGAGAAATCTCTATGACTTGGAGGAGCCACGATCCAGGGCTCAAAGTCCCCATAATTCCTATCAAGGATTTCCACAGGCTGAAGAGGAAGAGGGGAAGGAAAACGGTAAACAAGGTCTTGAAAATCGGGAGGGATTGAAGGTTCTACCGTTCGAGTTCGTCGCGTTGGAGGCGTGCCTTGAAGCTGCCTGCAGCTGCTTAGAAAGTGAAGCAGATACGTTGGAGCAAGAAGCTCACCCAGCTTTGGATAAGCTGACTTCTAAGATTAGTACTCTCAACTTGGAACGTGTGCGTCAAATCAAAAGTCGATTGGTTGCGATAACTGGACGAGTTCAAAAGGTGAGGGACGAATTAGAGCACTTGCTAGATGATGATGAGGATATGGCTGAGATGTACTTAACAGAGAAGATGGTTCAGCAACAGCTTGAGACCTCTTCCACTTCTTCAATTCCCGAGAGAGACGAAATGGACGATGATGTTCAGCAATTAGGCAAAGATGACAGGGAGGACAGTATTCCTGCTGAAATATCATTGGAAGGTGGTGGAAATTCTGCTAATTATGAAGGCAATATAGATGCTTCACAGGATCATTTATTTGGTGCATCAAATGTGGGCAGGGACAGCCATGGAACTCGGACAAGCACTACCCACAGCGCTGTAAGCAAACTCCTCGATGTCGAGGAGCTAGAGATGCTGTTGGAGGCTTACTTCGTGCAAATTGATGGTACCCTCAACAAACTTTCAACGCTGAGGGAGTATGTAGATGACACAGAAGATTACATCAACATAATGCTAGATGACAAGCAGAATCATCTTTTACAAATGGGAGTAATGTTGACAACAGCGACCCTCGTCGTCAGTGCTTTCGTCGTGGTAGCAGGTATCTTCGGGATGAACATCCATATTGAACTATTCGAACCAGAAAAAGCAGGCATGCCAGAGTTCATGTGGACTGTTGGTGGTGGCACCATGGGAACCATCTTCCTGTATGTCATTGCCATTGCCTGGTGCAAGCACAAACGTTTGCTCGAGTAG 1497 49.3 MRGQHSHPPKPVFAGPDDENEPCRSYLAGTNAPLGAGIRKKGTGVRPWLLLDLTGGAQVVEAGKHAIMRRTGLPARDLRILDPMLSYPSTILGREKAIVINLEHIKAIITAQDVFVLNARDPSVTPFVEELQRRVLRHYQATKAAQEGNGDDSSWRNLYDLEEPRSRAQSPHNSYQGFPQAEEEEGKENGKQGLENREGLKVLPFEFVALEACLEAACSCLESEADTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKMVQQQLETSSTSSIPERDEMDDDVQQLGKDDREDSIPAEISLEGGGNSANYEGNIDASQDHLFGASNVGRDSHGTRTSTTHSAVSKLLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFEPEKAGMPEFMWTVGGGTMGTIFLYVIAIAWCKHKRLLE 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9219259 9222861 - Carg23044-RA Car11g01150 157103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01150 498 MobiDBLite consensus disorder prediction 163 191 - -
Car11g01150 498 Pfam CorA-like Mg2+ transporter protein 382 488 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Car11g01150 498 Coils Coil 211 231 - -
Car11g01150 498 MobiDBLite consensus disorder prediction 1 22 - -
Car11g01150 498 MobiDBLite consensus disorder prediction 352 371 - -
Car11g01150 498 MobiDBLite consensus disorder prediction 293 314 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01150 Car19g00399 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00165 Car-Chr1:864890 Car11g01150 Car-Chr11:9219259 1.42E-116 dispersed
Car11g01150 Car-Chr11:9219259 Car14g00950 Car-Chr14:5749064 2.39E-115 dispersed
Car11g01150 Car-Chr11:9219259 Car19g00399 Car-Chr19:5901130 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01150 - - mcha:111017360 844.343