Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01163 CAGATTTTCAGTGTAGTTAAACAGAAGAATCCTTTAAGAGCCTACTCTCATACTGTTCATCAACATTGTGGATCTTCCTTCAACTTACATTATTCCCGCTCGAAGAAAGTGACCGTTCCATCAAGCATCATAAATTGCTGGAGGAATGACTATTCCTTTGTCCCTATACAATCCCACAACAATGCTACTACGTTAAACATCAAATTAGATGGACGAAATGGATACAATTGGTATAATCATAGGCATAAACCAAGGCAAAGATCAAGAATGCATGCAGCTATTGATGTTGCAGCTGCTGTGGATGTCATCAACGATTTAGGATTGGACACACTGACATTCCTAGCTGTGACTGTCATAGTTGTTCCACTATTTAGGAGAATTAAAGCTAGCCCTATTCTCGGTTTCTTCTTTGCTGGGATTGTACTTAATCAATTTGGTGTGATTAGAAATCTTACAGATGTTAAAGTTTTGTCCGAATGGGGAATACTTTTCCTGCTATTTGAGATGGGGTTGGAGCTTTCATTTGCGCGTCTAAAAGCTCTTGCAAGGTTTGCGTTCGGCATGGGTTTGACACAGGTCATGTTATCGACTATCGCTTTCACAGCGTTTGAACTTCCCCCTAATGGAGCTATTGGAACAAGGATTTTGGAGTTCCTTTTTCACGCCAGATCTGACTTGGTTAACATCAGAAGCGTCGATGAAGCGATTGTGATCGGTGCTGCCCTCTCTCTATCTTCTTCAGCGTTCGTTTTACAGCTTCTTGCAGAGAAAGGAGAGCTTGCAACAAGATTTGGGTCAGCAACTCTAGGGATACTTCTTCTTCAGGATATTGCTGTTGTCCCTCTCTTGGTCATACTTCCTGTTCTTGAGAGCCAGAATTTGGGCACGGAAAGTATCTGGCCAATGCTTGCACAAGAAAGTCTCAAGGCTTTAGGTGGACTCGGTCTGCTGTCCCTTGGAGGAAAGTTGATTCTTAGGCGAGTTTTCGAGGTCGTTGCGGAAGCAAGAAGCTCAGAGGCTTTTGTGGCTCTTTGCCTGCTGACAGTTGCTGGCACATCACTAATCACTCAGAAACTGGGCTTTAGTGACACGCTGGGAGCATTTTTGGCTGGAGCAATATTAGCAGAAACTAATTTCCGGACACAGATTGAAGCTGATATTAGGCCATTTAGGGGCTTGCTCCTCGGGTTATTCTTTGTTACGACCGGGACCTCCATTGATACGCAGCTCCTGTTTCGAGAATGGCCGAATGTCCTTGCCCTTTTGGCAGGTTTAATAGCCATCAAGACGCTTATAATAACAGCAATAGGTCCCCGTGTCGGTCTCACAACTCAAGAAAGTGTACGAATAGGATTTCTTCTATCGCAAGGAGGCGAGTTCGGGTTTGTAGTGTTTTCTCTGGCAAACAGGCTTGGAGTGTTACCACTTGAGTTAAACAAGCTACTCATCATCATTGTTGTCTTGTCAATGGCTCTAACCCCGTTGCTTAACGAAGCTGGACGGAAGGCGTCTGAATACATCAGTGAAAAGTACAAGACAGACGATAAAGCTGCAGACACGGTGAATTTCGACGCTACCGAACCTGTTATCATCGTTGGATTCGGTCAAATGGGTCAGGTCCTGGCAAATTTCTTATCTACACCTTTGGTATCTGGAGCTGATGGCAGCTCTCCTGGATGGCCATATGTAGCGTTTGATATCGATCTTTCCGTAGTGAAGAGGTCAAGAAAACTTGGTTTTCCCGTTCTCTACGGAGACGGATCACGACCAGCAGTTCTGCAATCTGCTGGAATCTCTTCTCCAAAAGCTGTCATGGTTATGATCACGGAGAAGAAGGCAACAATCGAGGCCGTTCAAAAGCTCCGTCTCGCCTTCCCTGCGATCCCGATTTACGCCCGAGCTAAAGACGTGATGCATCTATTAGATTTAAAGAATGCCGGTGCGACGGATGCTATTCTGGAAGATGCTGAGACTAGTTTACAACTTGGGTCAAAGCTTTTGAAAGGGCTCGGCGTCATGTCCGACCAAGTGTCGTTCCTTAGTCAGATGGTTCGAAACTCTATGGAAGTACGAGCACAAGATGCACTCGACAAATCCAACGAGCAAGAGTTAGAGATTATGAAACCACTGCAGATACGTGTGAAGGACTCGATCATGACCCCGGAGAGCGAACTGTCGAGGCTGAACGGCAAAGAAATGGATGAAAGGAAGCAAGAAGATTTAGATGGAAAAGGAGTCCTATACTGTGAACTTGATACAGAGGAAAACAGTTCAGATCCTGATAATATGGTTCAGCGTCCAACCCCTTACATCACAGCCACTGATGCCTTAGAGAACTGA 2340 45.04 QIFSVVKQKNPLRAYSHTVHQHCGSSFNLHYSRSKKVTVPSSIINCWRNDYSFVPIQSHNNATTLNIKLDGRNGYNWYNHRHKPRQRSRMHAAIDVAAAVDVINDLGLDTLTFLAVTVIVVPLFRRIKASPILGFFFAGIVLNQFGVIRNLTDVKVLSEWGILFLLFEMGLELSFARLKALARFAFGMGLTQVMLSTIAFTAFELPPNGAIGTRILEFLFHARSDLVNIRSVDEAIVIGAALSLSSSAFVLQLLAEKGELATRFGSATLGILLLQDIAVVPLLVILPVLESQNLGTESIWPMLAQESLKALGGLGLLSLGGKLILRRVFEVVAEARSSEAFVALCLLTVAGTSLITQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDTQLLFREWPNVLALLAGLIAIKTLIITAIGPRVGLTTQESVRIGFLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIIVVLSMALTPLLNEAGRKASEYISEKYKTDDKAADTVNFDATEPVIIVGFGQMGQVLANFLSTPLVSGADGSSPGWPYVAFDIDLSVVKRSRKLGFPVLYGDGSRPAVLQSAGISSPKAVMVMITEKKATIEAVQKLRLAFPAIPIYARAKDVMHLLDLKNAGATDAILEDAETSLQLGSKLLKGLGVMSDQVSFLSQMVRNSMEVRAQDALDKSNEQELEIMKPLQIRVKDSIMTPESELSRLNGKEMDERKQEDLDGKGVLYCELDTEENSSDPDNMVQRPTPYITATDALEN 779
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9334589 9342352 - Carg23057-RA Car11g01163 157116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01163 779 MobiDBLite consensus disorder prediction 727 749 - -
Car11g01163 779 Pfam Sodium/hydrogen exchanger family 113 497 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Car11g01163 779 MobiDBLite consensus disorder prediction 723 779 - -
Car11g01163 779 Pfam TrkA-N domain 529 652 IPR003148 GO:0006813
Car11g01163 779 ProSiteProfiles RCK N-terminal domain profile. 528 660 IPR003148 GO:0006813
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00929 Car-Chr6:7202971 Car11g01163 Car-Chr11:9334589 8.37E-100 dispersed
Car11g01163 Car-Chr11:9334589 Car14g01823 Car-Chr14:14184341 5.37E-91 dispersed
Car11g01163 Car-Chr11:9334589 Car19g00378 Car-Chr19:5601757 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01163 - - csv:101209266 1269.6