Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01168 ATGTTGCAGTTTTCGATTCGGCGAGTGAGGAAATTGAATGTTCTGAGGCCTCAGATCTTTGCTCTTAGCAATTCTCGATTCTCCACCTCTCCTGAACCGTCTTCCAAGCCTAATCCTCCGAGAGTTCCTAATCTTATAGGAGGGAATTTTGTTGATTCCCGATCCTCAGCGTTTATAGATGTCATAAATCCAGCGACCCAAGAGGTTGTTTCTCAAGTTCCATTAACCACAAATGAAGAATTTAAAGCTGCAGTATCTGCAGCAAAGCAGGCTTTTCCTGCATGGCGTAATACCCCAGTCACAACTCGCCAAAGAGTTATGCTCAAGCTTCAAGAACTTATCAGGCGAGATATTGACAAACTTGCTCTAAATATTACCACAGAACAAGGAAAAACATTAAAGGATGCGCATGGAGATGTATTCCGGGGGCTAGAGGTCGTGGAACATGCATGTGGAATGGCATCTCTGCAAATGGGGGAGTATGTCTCTAATGTTTCACATGGAATTGATACGTACAGCATCAGAGAGCCTCTAGGCGTTTGTGCTGGGATTTGTCCATTCAATTTTCCAGCCATGATTCCCCTATGGATGTTTCCAATTGCTGTTACATGTGGGAATACCTTTGTTTTGAAGCCTTCAGAAAAAGATCCAGGGGCTTCTATAATCCTTGCAGAGTTAGCAATGGAGGCTGGATTGCCTAATGGTGTCCTAAATGTAGTTCATGGTACTAATGATGTTGTTAATGCCATTTGTGATGATGAAGATATAAAAGCAATATCATTTGTTGGTTCGAACATTGCGGGCATGCATATATTTTCAAGGGGATCAGCTAAAGGAAAACGTGTTCAGTCCAATATGGGGGCAAAAAATCATGCAATTGTCTTGCCTGATGCCAACATAGATGCTACTTTGAATGCTTTGGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCACTCAGTACAGTTGTCTTTGTTGGAGACTCCAAATTGTGGGAGGATAAACTTGTAGAACGTGCCAAAGCTCTGAAGGTAAGTTCTGGAACAGAACCTGATGCAGATCTTGGTCCAGTAATTAGCAAGCAGGCAAAGGAGAGGATTCACAGATTAGTTCAATCTGGCATCGATAGTGGAGCCAGGCTACTGCTAGATGGGAGAGATATAGTGGTTCCTGGATATGAGCAAGGAAATTTTATTGGCCCTACTGTCTTAACAGACGTGACGCCTGACATGGAGTGCTACAAGGAAGAAATATTTGGCCCAGTTCTGCTTTGCATGCAGGCTGAAAGTTTTGAGGAGGCCATTAGCATCGTTAACAGAAATAGGTATGGCAATGGAGCTTCTATATTCACCGAATCTGGCATAGCAGCGAGGAAGTTTCAAACTGAAATTGAAGCTGGACAGGTCGGAATCAACGTTCCAATCCCCGTTCCCTTACCCTTCTTCTCGTTCACTGGCTCGAAGGCATCTTTCGCCGGGGATCTCAACTTTTATGGGAAGGCAGGGGTTAATTTCTTCACTCAGATCAAAACAGTTACACAACAATGGAAAGAATCAGGTGGGGGAAGTGCCGTCAACCTTGCAATGCCAACCTCTTTGAAGTCATAG 1614 44.05 MLQFSIRRVRKLNVLRPQIFALSNSRFSTSPEPSSKPNPPRVPNLIGGNFVDSRSSAFIDVINPATQEVVSQVPLTTNEEFKAAVSAAKQAFPAWRNTPVTTRQRVMLKLQELIRRDIDKLALNITTEQGKTLKDAHGDVFRGLEVVEHACGMASLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPNGVLNVVHGTNDVVNAICDDEDIKAISFVGSNIAGMHIFSRGSAKGKRVQSNMGAKNHAIVLPDANIDATLNALVAAGFGAAGQRCMALSTVVFVGDSKLWEDKLVERAKALKVSSGTEPDADLGPVISKQAKERIHRLVQSGIDSGARLLLDGRDIVVPGYEQGNFIGPTVLTDVTPDMECYKEEIFGPVLLCMQAESFEEAISIVNRNRYGNGASIFTESGIAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFFTQIKTVTQQWKESGGGSAVNLAMPTSLKS 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9362078 9369727 + Carg23062-RA Car11g01168 157121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01168 537 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 312 323 IPR016160 GO:0016491
Car11g01168 537 Pfam Aldehyde dehydrogenase family 50 514 IPR015590 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01168 Car-Chr11:9362078 Car20g00250 Car-Chr20:1444254 2.68E-67 dispersed
Car03g00775 Car-Chr3:6470378 Car11g01168 Car-Chr11:9362078 0 transposed
Car11g01168 Car-Chr11:9362078 Car19g00366 Car-Chr19:5523762 7.06E-07 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01168 K00140 - csv:101204924 985.326