Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01180 ATGGATTTCCTCTCCCGAAAGCTCCTCTCCGACGACGACGACGACGACCTCAAGAAACTCTGCCTTAAAACCTGCCCCAATTACTCTCCCGATTCTTGCCCTTCCAATTGCCTCGAAAAATGCCCAAACCTTTGTTCCCGTGGCTCGATTTCAATCCCGCCGCCCTACTACGACAAATCGCCTCACAAACTCTCCAATTGGGTCACAGCCACCATCGCCTTTCTCTCTTTCACCTTTCTCCTCGTCCTCTGTTACACCGTCTACGTCCGTTTCTACTCCGGCCGCCGCAGACGCCACCAACGCCCTGACCCCCCACCGCCCACCACCCACCAAGAGGAGTTTCTCGATGAAGAACATGGCCCTGTTTTGGATCACCCCATCTGGTATATCCGTACCATCGGCCTCCCGCCGGCTGTCATCAACGCCATCGCTATCTGCAAATTCAAAACCGGCGAGGGTTTGATCGACGGAACAGAGTGCTCTGTTTGTTTAAGCGAATTTGAAGAGGATGAGACTCTTAGACTTTTGCCTAAGTGTAGCCACGCTTTTCATCTCCCCTGTATCGACACTTGGCTTCAATCCCACACGAACTGCCCCATGTGCCGCGCTCCAGTGGTAGCTCAATCCACCGCCGTGACCCCACCGCCGCCGCCGCCTCCGCCTCCTCTGGTCACATCTGAAGAAACCCAGATGAGGGATTTACAGAGGGAAGTGGGAAATGGATCCAATTCCGGCGAATCTTCTCTAAGAAACGAAGAACAACAAGAACAAGATGAAATTCAGCCAGTGAGAAGATCAGTTTCTTTAGATTCATTATCAGCTCTTCGAATAATCTCTGATCTTGCTGACATTGGTATGAGAAATGGGAATGATTTGAAGAAGAAATCATGCCAAGAGAGAGTGAATTCTTCAGCAGTTATGAACAGGTCAGTTTCTTGCAGTGGCGAATTTGTGATGAGAAATTCGACACAGAGTAGTAGTTGA 984 50.41 MDFLSRKLLSDDDDDDLKKLCLKTCPNYSPDSCPSNCLEKCPNLCSRGSISIPPPYYDKSPHKLSNWVTATIAFLSFTFLLVLCYTVYVRFYSGRRRRHQRPDPPPPTTHQEEFLDEEHGPVLDHPIWYIRTIGLPPAVINAIAICKFKTGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLQSHTNCPMCRAPVVAQSTAVTPPPPPPPPPLVTSEETQMRDLQREVGNGSNSGESSLRNEEQQEQDEIQPVRRSVSLDSLSALRIISDLADIGMRNGNDLKKKSCQERVNSSAVMNRSVSCSGEFVMRNSTQSSS 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9561590 9562573 - Carg26463-RA Car11g01180 157133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01180 327 MobiDBLite consensus disorder prediction 210 225 - -
Car11g01180 327 ProSiteProfiles Zinc finger RING-type profile. 160 202 IPR001841 -
Car11g01180 327 Pfam Ring finger domain 159 202 IPR001841 -
Car11g01180 327 MobiDBLite consensus disorder prediction 237 265 - -
Car11g01180 327 MobiDBLite consensus disorder prediction 209 228 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01180 Car19g00344 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01180 Car-Chr11:9561590 Car14g01725 Car-Chr14:13632281 5.63E-36 dispersed
Car17g00015 Car-Chr17:61318 Car11g01180 Car-Chr11:9561590 4.99E-22 dispersed
Car11g01180 Car-Chr11:9561590 Car19g00188 Car-Chr19:1723937 6.83E-48 wgd
Car11g01180 Car-Chr11:9561590 Car19g00344 Car-Chr19:5318670 1.25E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01180 - - cmo:103495376 399.053