Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g01195 | ATGGCTGCAACGGCTGCAACTTCTGGTGCTCTGCTTAATGGGTTAGGCTCACCCTTCCTCCATGGAGGTAGCAGAACCCAAACCTTGCTGGCCGGTGCCAGAGGCGGTGTCAATGTTGTCAGCTCTCGCAAGCTTGTCATCGTCGCTGCTGCTCAGCCCAAGAAGTCTTGGATCCCCGCCGTTAAGGGCGGCGGCAACTTCATCGACCCGGAATGGCTCGATGGCTCACTACCAGGCGATTACGGCTTCGACCCACTGGGGTTGGGGAAGGATCCAGCATTTCTGAAATGGTACAGAGAAGCAGAGCTAATCCACGGGCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCATCGGCCAGGCCTGGAGCGGGATCCCATGGTTCGAAGCCGGAGCCGATCCGTCCGCAATCGCTCCATTCTCCTTCGGATCACTGCTCGGAACACAGCTTCTACTAATGGGATGGGTCGAGAGCAAACGATGGGTAGATTTCTTCAACCCGGAGTCTCAATCCGTGGAATGGGCAACGCCATGGTCGAGGACCGCAGAGAACTTCGCAAACGCAACGGGAGAACAGGGGTACCCAGGAGGGAAATTCTTCGATCCATTGGGATTTGCAGGAACTCTCAAGGATGGAGTTTATATTCCAGACACGGAGAAATTGGAGAGATTGAAGCTGGCAGAGATCAAGCATGCGAGAATCGCCATGTTAGCTATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCCATTGGGGGCTCTTGGATTGTAG | 777 | 55.21 | MAATAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL | 258 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9678099 | 9680009 | - | Carg26448-RA | Car11g01195 | 157148 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g01195 | 258 | Pfam | Chlorophyll A-B binding protein | 70 | 246 | IPR022796 | - | |
Car11g01195 | 258 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 4 | 258 | IPR001344 | GO:0009765|GO:0016020 | |
Car11g01195 | 258 | SUPERFAMILY | Chlorophyll a-b binding protein | 67 | 258 | - | - | |
Car11g01195 | 258 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC | 4 | 258 | - | - | |
Car11g01195 | 258 | Gene3D | Chlorophyll a/b binding protein domain | 70 | 257 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car11g01195 | Car-Chr11:9678099 | Car15g00557 | Car-Chr15:3074980 | 1.03E-178 | dispersed | |
Car11g01195 | Car-Chr11:9678099 | Car07g01031 | Car-Chr7:5968924 | 1.69E-28 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g01195 | K08917 | - | csv:101204705 | 498.819 |