Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01195 ATGGCTGCAACGGCTGCAACTTCTGGTGCTCTGCTTAATGGGTTAGGCTCACCCTTCCTCCATGGAGGTAGCAGAACCCAAACCTTGCTGGCCGGTGCCAGAGGCGGTGTCAATGTTGTCAGCTCTCGCAAGCTTGTCATCGTCGCTGCTGCTCAGCCCAAGAAGTCTTGGATCCCCGCCGTTAAGGGCGGCGGCAACTTCATCGACCCGGAATGGCTCGATGGCTCACTACCAGGCGATTACGGCTTCGACCCACTGGGGTTGGGGAAGGATCCAGCATTTCTGAAATGGTACAGAGAAGCAGAGCTAATCCACGGGCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCATCGGCCAGGCCTGGAGCGGGATCCCATGGTTCGAAGCCGGAGCCGATCCGTCCGCAATCGCTCCATTCTCCTTCGGATCACTGCTCGGAACACAGCTTCTACTAATGGGATGGGTCGAGAGCAAACGATGGGTAGATTTCTTCAACCCGGAGTCTCAATCCGTGGAATGGGCAACGCCATGGTCGAGGACCGCAGAGAACTTCGCAAACGCAACGGGAGAACAGGGGTACCCAGGAGGGAAATTCTTCGATCCATTGGGATTTGCAGGAACTCTCAAGGATGGAGTTTATATTCCAGACACGGAGAAATTGGAGAGATTGAAGCTGGCAGAGATCAAGCATGCGAGAATCGCCATGTTAGCTATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCCATTGGGGGCTCTTGGATTGTAG 777 55.21 MAATAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSGIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9678099 9680009 - Carg26448-RA Car11g01195 157148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01195 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
Car11g01195 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 258 IPR001344 GO:0009765|GO:0016020
Car11g01195 258 SUPERFAMILY Chlorophyll a-b binding protein 67 258 - -
Car11g01195 258 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 4 258 - -
Car11g01195 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01195 Car-Chr11:9678099 Car15g00557 Car-Chr15:3074980 1.03E-178 dispersed
Car11g01195 Car-Chr11:9678099 Car07g01031 Car-Chr7:5968924 1.69E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01195 K08917 - csv:101204705 498.819