Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01213 ATGGATAACATCACGGCGCAATTAAAGCGCGGAATCTCCCGCCAATTCTCCACTGGCTCTCTCCGCCGTAGTCTCAGCCGCCAATTCTCCCGACAATCCTCTTTAGACCCTCGTCGGAATAATCTAAGATTCAGCTTCGGCCGCCAATCCTCTCTCGACCCTATTCGCCGTTCTCCTGGTGAAGACAATGACCTCTCTGTTCCTGAAAATTTGGACTCCACTATGCAGCTGCTCTTCATGGCTTGTCGTGGCGATGTCCGTGGCGTTCAGGATTTGCTTAATGATGGCACCGATGTTAATAGCATTGATTTGGATGGCCGCACTGCTTTGCATATTGCTGCTTGTGAGGGCCATGCTGAGGTTGTTAAGTTCTTGCTTACCCGTAAGGCTAATATTGATGCTCGTGATCGTTGGGGGAGTACGGCAGCTGCTGATGCTAAATATTATGGGAATATTGAGACACCAATGACTGTTGCAAATCCCAGGGAAGTTCCTGAGTATGAGCTTAATCCATTGGAGCTTCAGATTCGAAGGGGTGATGGCATGTCACTTCACCAAATGATTTTAGTATTACAAGACAAAGATTCTTGTCGCAATTACTTGGGGACATATCAAGTTGCCAAATGGAATGGTACAAAAGTGGCTGTGAAAATTCTTGATAAGGATTGTTATTTTAATCCGGATTCTATAAACGCATTCAAACACGAGTTGACGTTACTCGAAAGGGTTCGACATCCGAACGTAGTTCAGTTTGTCGGGGCCGTTACGCAGAATTTGCCGATGATGATCGTTTCGGAATACCATCCAATGGGTGATTTAGGTTTCTATCTTCAAAAGAAAGGTCGTTTATCTCCGTCTAAAGCCTTACGATTCGCCCTCGATATCGCTAGGCAAGGGAATGAACTATCTTCACGAATGCAAACCGGAGCCTATTATCCACTGCGATTTAAAGCCAAAATGGTTGAAGGTATGCAGCCATTCCATCCTAGGCCTCCGGAAGAGGCGTCGAAAGCTATGTGTGTCGAACGAAAGAGACCTCCGTTTAAGATCAAATCGAAAAGTTATCCACCTGATCTAAAAGAATTGATAGAGGAATGCTGGGCTCCAGAACCTGTTGTGAGGCCTACTTTCTCTGAAATTATTGTAAGGTTAGATAAAATAGTCATCAACTGCTCGAAACATGGATGGTGGAAAGACACGTTTAAACTTCCC 1212 45.13 MDNITAQLKRGISRQFSTGSLRRSLSRQFSRQSSLDPRRNNLRFSFGRQSSLDPIRRSPGEDNDLSVPENLDSTMQLLFMACRGDVRGVQDLLNDGTDVNSIDLDGRTALHIAACEGHAEVVKFLLTRKANIDARDRWGSTAAADAKYYGNIETPMTVANPREVPEYELNPLELQIRRGDGMSLHQMILVLQDKDSCRNYLGTYQVAKWNGTKVAVKILDKDCYFNPDSINAFKHELTLLERVRHPNVVQFVGAVTQNLPMMIVSEYHPMGDLGFYLQKKGRLSPSKALRFALDIARQGNELSSRMQTGAYYPLRFKAKMVEGMQPFHPRPPEEASKAMCVERKRPPFKIKSKSYPPDLKELIEECWAPEPVVRPTFSEIIVRLDKIVINCSKHGWWKDTFKLP 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9864531 9869363 + Carg23998-RA Car11g01213 157166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01213 404 ProSiteProfiles Ankyrin repeat profile. 105 137 IPR002110 GO:0005515
Car11g01213 404 Pfam Ankyrin repeats (3 copies) 77 136 IPR002110 GO:0005515
Car11g01213 404 Pfam Protein tyrosine and serine/threonine kinase 202 304 IPR001245 GO:0004672|GO:0006468
Car11g01213 404 ProSiteProfiles Protein kinase domain profile. 174 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01213 404 ProSiteProfiles Ankyrin repeat region circular profile. 105 137 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01213 Car-Chr3:9472113 Car11g01213 Car-Chr11:9864531 1.23E-32 dispersed
Car11g01213 Car-Chr11:9864531 Car19g00236 Car-Chr19:2383166 1.55E-30 dispersed
Car11g01213 Car-Chr11:9864531 Car20g00218 Car-Chr20:1256883 2.73E-80 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89192 PF07714 PK_Tyr_Ser-Thr 4.40E-16 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01213 - - zju:107408169 550.436