Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01257 ATGGAGCAAGGTTCTGGGTTTGCCACTTCCTCCCCCGCTTCTCAGCTTTCGGGAGCGTACCTCACAAGGAATTTACTACTTGCATACCAAAGTTTTGGTGTAGTGTATGGAGATTTGAGTACTTCGCCCCTCTATGTTTACTCGAGTACGTTTGCAGGGAAGTTACTGACACATCGAACTGAGGAAGTAGTATTTGGTGCATTTTCGTTGATCTTCTGGACTCTTACACTGATACCATTGTTGAAGTATGTCTTCATTGTATTGAGCGCAGATGACAATGGTGAAGGAGGAACCTTTGCTCTTTACTCCCTGCTCTGTCGACATGCTAAGTTGAGTTTACTTCCTAACCAACAAGCAGCTGATGAGGAGCTCTCAGCTTACAAATATGGACCATCTTCTCACGTAGTAGCCCCTTCTCCACTAAAAAGGTTTTTGGAAAGGCATAAAACACTTAGGACGGTCTTACTTCTTGTCGTATTATTTGGTGCTTGCATGGTCATTGGTGATGGTGTGCTGACTCCTGCAATTTCAGTTCTATCCTCAGTTTCAGGTTTAAAAGTTACTGAAGCAAAATTGTCCAATGGGACACTCCTTTTGATTGCCTGTGTCATATTGGTTGGTCTGTTTGCTCTGCAGCATTGTGGCACCCATAAGGTTGCGTTTATGTTTGCTCCAATAGTTATCATCTGGTTGTTGTCAATTTTCTCCATTGGTTTGTACAACATAATACGTTGGAACCCAAGTATTGTACGCGCAATTTCCCCTCATTATGTTATCAAGTTCTTAAGAGTCACCGGTAAAGACGGTTGGCTTTCTCTTGGAGGGGTTCTTCTGGCCATAACTGGTACTGAAGCTATGTTTGCAGATCTTGGTCATTTCACTGCTTTGTCTATAAGGCTTGCTTTTGTATTCATTATCTACCCTTGTTTGGTAGTACAATACATGGGTCAAGCTGCCTTTCTGTCTAAGAACCTTCATTTGTTTCCAAACAGTTTTTATGACTCGATACCTGAACCTGTATTTTGGCCTGTTTTTATTATTGCTACCCTGGCGGCTATTGTGGGGAGCCAAGCTGTGATTACTGCTACGTTCTCTATTGTCAAACAATGCCATGCCCTTGGTTGCTTTCCAAGAGTGAAAGTTGTCCACACCTCTAAACACATATATGGGCAGATCTACATCCCAGAAATAAACTGGATATTAATGATCCTTACTCTTTCCATTACGATCGGGTTTCAAGATACGACAATGATTGGAAATGCTTACGGACTCGCTTGCATGACAGTTATGTTCACGACGACATTTCTTATGGCACTCGTCATTGTATTCGTTTGGCAAAAAAGTATCCTGCTGGCTGCACCTTTCATCATCTTCTTCTGGTCTGTCGAGGGTGCCTACTTATCAGCAGCAATCATAAAAGTGCCTCAAGGAGGGTGGGTTCCGCTTGTGCTGTCAGCGTTTTTTATGATTGTTATGTTCGTCTGGCATTATGGCACTCGCAAGAAGTACAACTTTGATCTACACAATAAAGTTTCACTGAAGTGGTTGCTTGGACTAGGCCCGAGTCTTGGTATAGTTCGCGTCCCGGGAATTGGTCTCATATACTCGGAATTGGCAACAGGAGTTCCCGCAATATTTTCTCACTTCGTGACGAATCTCCCTGCGTTTCACAAAGTTTTAGTCTTCGTGTGCGTAAAGTCTGTTCCTGTTCCGTATGTCTCGCCCGAAGAACGTTTTCTCATTGGGAGGGTCTGTCCTAGACCGTATCGCATGTATCGGTGCATAGTGAGGTATGGCTACAAGGATATTCAGAAGGATGATGGGGACTTTGAGAACCAGTTGATACTAAACATTGCAGAATTCATTCAAATGGAGGCAGAGGAACCACAATTCTCAAGCTCCGAAAACTCTTCAATCGATGGGAGGATGGCCGTGATAAGCACACGAAGCATACAATCGAACTTGAGCTTCATAGTATCGGGCCACGAAGAAGTTGGTACCAGCAACTCCATCCTCAGCAGCAAATCTGCCACACTCCATAGTTTACGATCCGCCTACGAGGACGAGAACCCACAACTAAGAAGACGCCAGGTACGGTTTCAGCTATCTCCCAGCCCTTCAATAGACCCTAGAGTTAGGGAAGAGTTGATGGACTTGATCCAAGCCAAGGAGGCCGGTGTAGCATATATAATGGGACACTCATATGTCAAGGCTAGAAGATCATCGTCATACTTGAAAAAGCTCGTAATAGATATCGGGTACTCGTTTCTCCGCAAGAACTGTCGAGGCCCATCTGTGGCGCTCAACATCCCTCACATCAGTCTAATTGAAGTGGGGATGATCTATTATGTCTAG 2355 44.2 MEQGSGFATSSPASQLSGAYLTRNLLLAYQSFGVVYGDLSTSPLYVYSSTFAGKLLTHRTEEVVFGAFSLIFWTLTLIPLLKYVFIVLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSSHVVAPSPLKRFLERHKTLRTVLLLVVLFGACMVIGDGVLTPAISVLSSVSGLKVTEAKLSNGTLLLIACVILVGLFALQHCGTHKVAFMFAPIVIIWLLSIFSIGLYNIIRWNPSIVRAISPHYVIKFLRVTGKDGWLSLGGVLLAITGTEAMFADLGHFTALSIRLAFVFIIYPCLVVQYMGQAAFLSKNLHLFPNSFYDSIPEPVFWPVFIIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLSITIGFQDTTMIGNAYGLACMTVMFTTTFLMALVIVFVWQKSILLAAPFIIFFWSVEGAYLSAAIIKVPQGGWVPLVLSAFFMIVMFVWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQKDDGDFENQLILNIAEFIQMEAEEPQFSSSENSSIDGRMAVISTRSIQSNLSFIVSGHEEVGTSNSILSSKSATLHSLRSAYEDENPQLRRRQVRFQLSPSPSIDPRVREELMDLIQAKEAGVAYIMGHSYVKARRSSSYLKKLVIDIGYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10436771 10442146 - Carg25306-RA Car11g01257 157210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01257 784 PANTHER POTASSIUM TRANSPORTER 4 21 784 - -
Car11g01257 784 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 21 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
Car11g01257 784 Pfam K+ potassium transporter 29 602 IPR003855 GO:0015079|GO:0016020|GO:0071805
Car11g01257 784 TIGRFAM kup: potassium uptake protein 27 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01257 Car14g00708 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01257 Car-Chr11:10436771 Car16g00593 Car-Chr16:3760284 0 dispersed
Car18g00266 Car-Chr18:1544318 Car11g01257 Car-Chr11:10436771 0 dispersed
Car01g00620 Car-Chr1:3639274 Car11g01257 Car-Chr11:10436771 0 transposed
Car14g00708 Car-Chr14:3944010 Car11g01257 Car-Chr11:10436771 0 transposed
Car11g01257 Car-Chr11:10436771 Car14g00707 Car-Chr14:3940333 2.33E-41 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01257 K03549 - csv:101208973 1459.89