Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01274 ATGGCCATCTCAGAATCTCAAACCCGTTCCTCTCTGATTCCTACTTTTCTCTACTCGTCTTCGGCCATTCCGTTCCAGAAGATGCTTCGCTCCAATGATCCTTGTGTATCGCCGTCGCCATCGCCATCTCCGATTGTCGAATCTACACCGAGAAAGGCCTTCGCGATTCCGTCTCCGAGTGAACCGAGAAAGAAACTGGAGATGTATTCGCCGGCTTTCTACGCTGCCTGTGCCGTCGGTGGAAGCCTCAGTTGTGGTCTCACTCACACGGCCGTCACTCCTCTCGATCTCATTAAGTGCAATATGCAGATTGACCCTGTGAAATACAAGAGCATTTCATCAGGTTTTGGAGTTCTTTTAAAGGAGCAAGGAATCAGGGGCTTCTTCAGGGGTTGGGCGCCAACTTTTCTGGGTTACAGTGCTCAGGGTGCTTGCAAGTATGGTATCTATGAATTCTTTAAGAAATACTATTCCGACATAGCTGGTCCAGAGTATGCAGCAAATTACAAGACCTTGATCTATCTTGCTGGCTCTGCATCTGCTGAAGTGATTGCAGATGTTGCACTTTGCCCATTTGAAGCTGTTAAAGTTAGAGTTCAAACTCAGCCTGGTTTTGCTAGAGGTCTGTCTGATGGCCTTCCCAAATTCGTCAGATCTGAAGGTGCCCTTGGGTTGTACAAGGGTATTGTTCCTCTATGGGGGCGTCAGATCCCATATACAATGATGAAATTTGCAACATTTGAGAATCTCGTGGAGCTCATCTACAAGCATGTCATTCCCAAGCCAAAGAACGAATGCAGCAGCGCCTTGCAGCTGGGCGTCAGCTTTGCTGGTGGATATATTGCGGGAGTTTCTTGTGCTATAGTTTCTCACCCTGCAGACAATCTGGTCTCTTTTCTCAACAATGCTAAAGGGGCTACCGTTGGTGACGCTGTGAAGAAGCTTGGAGTATGGGGCCTCTTTACACGAGGGCTGCCTCTACGCATAGTCATGATTGGAACCCTCACTGGAGCTCAGTGGGTTATCTACGACGCATTTAAAGTTTTTGTCGGATTGCCAACTACCGGTGGGGTTGCCCCTGCCCCCGCCGCCGCCATTGAACTTCCAAGTGCGTAG 1116 49.01 MAISESQTRSSLIPTFLYSSSAIPFQKMLRSNDPCVSPSPSPSPIVESTPRKAFAIPSPSEPRKKLEMYSPAFYAACAVGGSLSCGLTHTAVTPLDLIKCNMQIDPVKYKSISSGFGVLLKEQGIRGFFRGWAPTFLGYSAQGACKYGIYEFFKKYYSDIAGPEYAANYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFATFENLVELIYKHVIPKPKNECSSALQLGVSFAGGYIAGVSCAIVSHPADNLVSFLNNAKGATVGDAVKKLGVWGLFTRGLPLRIVMIGTLTGAQWVIYDAFKVFVGLPTTGGVAPAPAAAIELPSA 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10624424 10628769 + Carg15526-RA Car11g01274 157227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01274 371 Pfam Mitochondrial carrier protein 173 257 IPR018108 -
Car11g01274 371 Pfam Mitochondrial carrier protein 74 158 IPR018108 -
Car11g01274 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 169 253 IPR018108 -
Car11g01274 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 72 156 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02143 Car-Chr4:17423269 Car11g01274 Car-Chr11:10624424 0 dispersed
Car11g01274 Car-Chr11:10624424 Car15g00765 Car-Chr15:4337829 0 dispersed
Car11g01419 Car-Chr11:11599927 Car11g01274 Car-Chr11:10624424 6.35E-57 transposed
Car10g00018 Car-Chr10:95616 Car11g01274 Car-Chr11:10624424 0 wgd
Car11g00008 Car-Chr11:42978 Car11g01274 Car-Chr11:10624424 8.42E-35 wgd
Car11g01274 Car-Chr11:10624424 Car14g00690 Car-Chr14:3799873 5.20E-13 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01274 K15102 - csv:101203018 615.535