Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g01283 | ATGAATGACGCTGATGTTTCCAAGCAGATCCAGCAGATGGTGAGGTTCATCCGCCAGGAAGCTGAGGAAAAGGCCAACGAGATCTCTGTCTCTGCTGAAGAAGAATTCAATATTGAAAAGCTGCAGCTGGTTGAGGCAGAGAAGAAGAAAATCAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTTGAAATTCGGAAGAAGATCGAGTACTCCATGCAGCTCAATGCTTCTCGGATCAAAGTTCTGCAAGCACAGGATGATGTAGTGAACTCCATGAAAGAGGCAGCGTCAAAAGAACTTCTTAATGTCAGCGGAAATGAACATGTCTACAAAAATCTGTTGAAGGAACTCATTGTTCAGAGCTTGCTTCGACTGAAAGAGCCAGCTGTTTTGTTGCGATGCCGCAAAAGTGACCTCCATTTGGTGGAGTCTGTGCTGAGTTCAGCAGCATATGAATATGCAAATAAAGCGGAAGTTCATGAGCCAGAGATCATCGTTGACCATGTCCATCTTCCACCTGGTCCAAGCCATCACCATCATCATGGCCCCTTTTGTTCTGGAGGTGTAGTAATGGCATCTCGAGATGGGAAGATTGTCTGTGAGAACACCCTTGATGCTAGGTTGGATGTCGTGTTCCGTAAAAAGCTTCCTGAGATCCGAAAAAGCCTTTTCAGTCAAGTTGCTGCATGA | 690 | 45.65 | MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNSMKEAASKELLNVSGNEHVYKNLLKELIVQSLLRLKEPAVLLRCRKSDLHLVESVLSSAAYEYANKAEVHEPEIIVDHVHLPPGPSHHHHHGPFCSGGVVMASRDGKIVCENTLDARLDVVFRKKLPEIRKSLFSQVAA | 229 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 10688909 | 10693261 | + | Carg15535-RA | Car11g01283 | 157236 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g01283 | 229 | Gene3D | - | 1 | 62 | - | - | |
Car11g01283 | 229 | Gene3D | - | 92 | 228 | IPR038495 | - | |
Car11g01283 | 229 | PANTHER | ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED | 1 | 220 | IPR002842 | GO:0033178|GO:0046961|GO:1902600 | |
Car11g01283 | 229 | Coils | Coil | 38 | 61 | - | - | |
Car11g01283 | 229 | PANTHER | BNAC03G72900D PROTEIN | 1 | 220 | - | - | |
Car11g01283 | 229 | SUPERFAMILY | V-type ATPase subunit E-like | 87 | 224 | - | - | |
Car11g01283 | 229 | Pfam | ATP synthase (E/31 kDa) subunit | 16 | 224 | IPR002842 | GO:0033178|GO:0046961|GO:1902600 | |
Car11g01283 | 229 | Hamap | V-type proton ATPase subunit E [atpE]. | 8 | 225 | IPR002842 | GO:0033178|GO:0046961|GO:1902600 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car11g01283 | Car-Chr11:10688909 | Car14g00679 | Car-Chr14:3739225 | 1.47E-149 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g01283 | K02150 | - | csv:101217221 | 386.726 |