Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01283 ATGAATGACGCTGATGTTTCCAAGCAGATCCAGCAGATGGTGAGGTTCATCCGCCAGGAAGCTGAGGAAAAGGCCAACGAGATCTCTGTCTCTGCTGAAGAAGAATTCAATATTGAAAAGCTGCAGCTGGTTGAGGCAGAGAAGAAGAAAATCAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTTGAAATTCGGAAGAAGATCGAGTACTCCATGCAGCTCAATGCTTCTCGGATCAAAGTTCTGCAAGCACAGGATGATGTAGTGAACTCCATGAAAGAGGCAGCGTCAAAAGAACTTCTTAATGTCAGCGGAAATGAACATGTCTACAAAAATCTGTTGAAGGAACTCATTGTTCAGAGCTTGCTTCGACTGAAAGAGCCAGCTGTTTTGTTGCGATGCCGCAAAAGTGACCTCCATTTGGTGGAGTCTGTGCTGAGTTCAGCAGCATATGAATATGCAAATAAAGCGGAAGTTCATGAGCCAGAGATCATCGTTGACCATGTCCATCTTCCACCTGGTCCAAGCCATCACCATCATCATGGCCCCTTTTGTTCTGGAGGTGTAGTAATGGCATCTCGAGATGGGAAGATTGTCTGTGAGAACACCCTTGATGCTAGGTTGGATGTCGTGTTCCGTAAAAAGCTTCCTGAGATCCGAAAAAGCCTTTTCAGTCAAGTTGCTGCATGA 690 45.65 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNSMKEAASKELLNVSGNEHVYKNLLKELIVQSLLRLKEPAVLLRCRKSDLHLVESVLSSAAYEYANKAEVHEPEIIVDHVHLPPGPSHHHHHGPFCSGGVVMASRDGKIVCENTLDARLDVVFRKKLPEIRKSLFSQVAA 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10688909 10693261 + Carg15535-RA Car11g01283 157236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01283 229 Gene3D - 1 62 - -
Car11g01283 229 Gene3D - 92 228 IPR038495 -
Car11g01283 229 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 220 IPR002842 GO:0033178|GO:0046961|GO:1902600
Car11g01283 229 Coils Coil 38 61 - -
Car11g01283 229 PANTHER BNAC03G72900D PROTEIN 1 220 - -
Car11g01283 229 SUPERFAMILY V-type ATPase subunit E-like 87 224 - -
Car11g01283 229 Pfam ATP synthase (E/31 kDa) subunit 16 224 IPR002842 GO:0033178|GO:0046961|GO:1902600
Car11g01283 229 Hamap V-type proton ATPase subunit E [atpE]. 8 225 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01283 Car-Chr11:10688909 Car14g00679 Car-Chr14:3739225 1.47E-149 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01283 K02150 - csv:101217221 386.726