Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01298 ATGGATCCTAAAACTTCATCATCAACAACAAAGCAGGCCCAAGAACTGGTACCAAACTTTTTGAACTTCCCACAAGAACACCAACAAGAACAATCAAACATGGGGGAAAACAAACCACCGGAAATCAAAGAAGAAGGTAAGAAACAATTAGCTCCAAAACGAAGCTCCAACAAAGACCGTCACACAAAAGTGGAAGGACGTGGGCGAAGAATCCGTATGCCGGCACTATGTGCGGCGAGGATTTTTCAATTAACAAGGGAATTGGGTCATAAATCCGACGGAGAAACCATCCAGTGGTTGCTACAGCAAGCGGAGCCATCGATAATCGCCGCCACTGGAACTGGAACGATCCCAGCTTCTGCTTTAGCAGCAGTGGCGGGTTCCGTTTCGCAACAAGGGGTTTCTCTCTCCGCCGGATTACAACAAAAATTGGAGGAATTAGGCGGTGGCGGGTCCAGTAGGGCCAGTTGGGGGAATTTGGGGAGACCCCATTTGGCTGCTGCTGCTGCCGCCGCCGCCGCAGCCGCCACAGCCACAGCGGTTTGGCCCTCCTCTGTCAGTGGGTTTGGGTTTCAGTCATCAACTACAGCTGGTGTTGCTCAATCAGCCACTAATTTAGCTAATGAAACTTCAAATTACTTTCATAAACTTGGTTTCCCAGCCTTTGACTTACCCCCCACCAACATGGGTCCTATGAGTTTCACCTCCATTCTAGGTGCCAACTCTCAACAGCTACCTGGTTTAGAGCTTGGATTGAGCCAAGATCCCCATATTGGGGCTATCAATCCACAAGCATTGAACCAGTTTTACCAACAAATGGGCCAAGCTAGAGTTCATCACCATCATCAACAACACCAGCAACCTCCTGCTAAAGATGATTCACAAGATTCAGGGTAG 897 48.83 MDPKTSSSTTKQAQELVPNFLNFPQEHQQEQSNMGENKPPEIKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAVAGSVSQQGVSLSAGLQQKLEELGGGGSSRASWGNLGRPHLAAAAAAAAAAATATAVWPSSVSGFGFQSSTTAGVAQSATNLANETSNYFHKLGFPAFDLPPTNMGPMSFTSILGANSQQLPGLELGLSQDPHIGAINPQALNQFYQQMGQARVHHHHQQHQQPPAKDDSQDSG 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10753075 10753971 - Carg15550-RA Car11g01298 157251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01298 298 MobiDBLite consensus disorder prediction 1 70 - -
Car11g01298 298 MobiDBLite consensus disorder prediction 1 36 - -
Car11g01298 298 Pfam TCP family transcription factor 56 146 IPR017887 -
Car11g01298 298 MobiDBLite consensus disorder prediction 274 298 - -
Car11g01298 298 MobiDBLite consensus disorder prediction 37 70 - -
Car11g01298 298 ProSiteProfiles TCP domain profile. 57 111 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01101 Car-Chr3:8883945 Car11g01298 Car-Chr11:10753075 6.83E-40 dispersed
Car07g00896 Car-Chr7:4811800 Car11g01298 Car-Chr11:10753075 5.21E-38 dispersed
Car10g00176 Car-Chr10:839601 Car11g01298 Car-Chr11:10753075 5.58E-38 dispersed
Car11g00147 Car-Chr11:831723 Car11g01298 Car-Chr11:10753075 3.74E-39 dispersed
Car11g01298 Car-Chr11:10753075 Car12g00219 Car-Chr12:1440937 2.23E-69 dispersed
Car13g00957 Car-Chr13:9659431 Car11g01298 Car-Chr11:10753075 1.25E-39 dispersed
Car11g01298 Car-Chr11:10753075 Car14g00666 Car-Chr14:3690759 1.65E-148 wgd
Car11g01298 Car-Chr11:10753075 Car17g01312 Car-Chr17:9868075 2.39E-63 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4328 PF03634 TCP 7.20E-31 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01298 - - cmax:111486688 533.102