Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01302 ATGGAGAATTACCAGATGTTTTTCCCCTGCTCCGGCGGCGAAGGGTTGTCGGCTTATCATCATCCCGACATGTCGCCCGACAGTGGGTCCGATGTTTTTGGGAGTTTTCACGGTGGGAATCTGCAGGGAAATGGGTTTGTGAAGATGGAGACGGCGGCGGTGGTGGAAGGCGACAGGAATAGCGGCGGCGATAGCTACCAGATCGGCGGCGGAAAAAAGAAAGGGGAGAAGAAGGTGAGGAAACCGAGATATGCTTTTGAGACAAAGAGCCAAGTTGACATTCTTGATGATGGATATCGTTGGAGGAAATATGGTCAAAAAGCTGTCAAAAACAACAAGTTTCCTAGGAGCTATTATAGGTGCACGCATCAAGGATGTAACGTGAAGAAACAAGTGCAAAGGTTAACAAGAGACGAAGGGGTAGTGGTGACAACATATGAAGGCATGCACACACACTCTATTGATAAGCCAACAGATAACTTCGAACAAATCTTGAGTAGAATGCAGATTTACGGTACATCTTTCTGA 528 46.97 MENYQMFFPCSGGEGLSAYHHPDMSPDSGSDVFGSFHGGNLQGNGFVKMETAAVVEGDRNSGGDSYQIGGGKKKGEKKVRKPRYAFETKSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTRDEGVVVTTYEGMHTHSIDKPTDNFEQILSRMQIYGTSF 175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10795648 10797314 + Carg15554-RA Car11g01302 157255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01302 175 Pfam WRKY DNA -binding domain 96 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car11g01302 175 MobiDBLite consensus disorder prediction 58 80 - -
Car11g01302 175 ProSiteProfiles WRKY domain profile. 90 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01302 Car14g00663 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01302 Car-Chr11:10795648 Car14g01287 Car-Chr14:10973869 2.39E-55 dispersed
Car11g01302 Car-Chr11:10795648 Car14g00663 Car-Chr14:3662835 4.40E-98 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4329 PF03106 WRKY 3.50E-26 CL0274 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01302 - - cmax:111486729 354.755