Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g01302 | ATGGAGAATTACCAGATGTTTTTCCCCTGCTCCGGCGGCGAAGGGTTGTCGGCTTATCATCATCCCGACATGTCGCCCGACAGTGGGTCCGATGTTTTTGGGAGTTTTCACGGTGGGAATCTGCAGGGAAATGGGTTTGTGAAGATGGAGACGGCGGCGGTGGTGGAAGGCGACAGGAATAGCGGCGGCGATAGCTACCAGATCGGCGGCGGAAAAAAGAAAGGGGAGAAGAAGGTGAGGAAACCGAGATATGCTTTTGAGACAAAGAGCCAAGTTGACATTCTTGATGATGGATATCGTTGGAGGAAATATGGTCAAAAAGCTGTCAAAAACAACAAGTTTCCTAGGAGCTATTATAGGTGCACGCATCAAGGATGTAACGTGAAGAAACAAGTGCAAAGGTTAACAAGAGACGAAGGGGTAGTGGTGACAACATATGAAGGCATGCACACACACTCTATTGATAAGCCAACAGATAACTTCGAACAAATCTTGAGTAGAATGCAGATTTACGGTACATCTTTCTGA | 528 | 46.97 | MENYQMFFPCSGGEGLSAYHHPDMSPDSGSDVFGSFHGGNLQGNGFVKMETAAVVEGDRNSGGDSYQIGGGKKKGEKKVRKPRYAFETKSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTRDEGVVVTTYEGMHTHSIDKPTDNFEQILSRMQIYGTSF | 175 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 10795648 | 10797314 | + | Carg15554-RA | Car11g01302 | 157255 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g01302 | 175 | Pfam | WRKY DNA -binding domain | 96 | 152 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Car11g01302 | 175 | MobiDBLite | consensus disorder prediction | 58 | 80 | - | - | |
Car11g01302 | 175 | ProSiteProfiles | WRKY domain profile. | 90 | 155 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car11g01302 | Car14g00663 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car11g01302 | Car-Chr11:10795648 | Car14g01287 | Car-Chr14:10973869 | 2.39E-55 | dispersed | |
Car11g01302 | Car-Chr11:10795648 | Car14g00663 | Car-Chr14:3662835 | 4.40E-98 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4329 | PF03106 | WRKY | 3.50E-26 | CL0274 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g01302 | - | - | cmax:111486729 | 354.755 |