Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01313 ATGGAAGAGGCACTGCCTTCTAAATCTTCCTCCCACTCACGGCTGCAACCCCAGTTCTCCTTCAGAGGTCTTCTTCTCCGTTTCAGCTCAGTGCCGCCGCTGCCTCTCTCACGCTCAGTGTCGCCGCCGCATCCTTCATCGATTTTCTACTCTCTGGTTGCTACTGTTATAATGTCGCCGAGCTCCATCTCTCAGCCGCTCGCCGCTGAGGGATTGCTAACTTCTCAAGGAAATTTCGAGAATCTCAATGGGGAAGAACGAATTTCTAACCCCCAAAGCGATCGCAAACAGAATCAAGGCAAAAGGGCTCCAGAAGCTCAGATGATCTTTGGCCAAAACCCCCATCGTATTGTTGAAGGTTATTCTGAAGAGTTTGAGAGATCTTTCATGGAGCACATTAAGCGTAGCCATCGGTTCAGTCGTGTGGCAGCTACAGTAGTCTACAATGAATACATTAATGACAGACATCATATTCATATGAATTCAACCCAGTGGGCTACACTCACTGAGTTTGTAAAACACTTGGGTCGAACAGGGCAGTGTAAGGTGGACGAGACTCCCAAGGGTTGGTTCATTACTTACATTGATAGAGATTCAGAGACGCTTTTTAAAGAGAAAATGAAAAACAAGAGGATGAGGGCAGATTTAGCTGAAGAAGAGAAGCAAGAGAGAGAGATACAGAAGCAAATTGAGAGGGCTGAGCAATTAGCACCTTTGGCTTCTGTATCTGCTGAGCCTTTGGAGGCTGAACAAACGAGGGAGTTAAAATTGGATAGTGGTGTTAAGCTTGGATTTTCTTTGGGAACAACATCAAAATTAAAGGAGAAAGGAGAGAGTTCCAGGGTGGTTTTTGATGAGGATGAGAATGGTGAGACTGCCAAGGGGAAACCCGGAGAGACTTCCAAAAACAAGATGGGTAGCGGTGGTCTGTCAGCTTTGGAGGCGTTGATGAGAGAAGAAGAGATGAAGAAGGAGAAGATTAATAGAAAGGATTACTGGCTGTGTGAGGGAATAATTGTGAAGGTCATGAGCAAGAATTTGGCTGAGATGGGATACTACAAACAGAAGGGAGTTGTGCGAAAGGTGATTGATAAATATGTTGGAGAGATTGAAACGCTTGATGGAAAGCATGTGTTGAGAGTTGATCAAGAAGAATTAGAAACAGTGATACCACAAATTGGTGGCTTAGTCAGGATAGTGAATGGGGCATATCGTGGATCGAATGCTAGGTTGTTGGGTGTTGACACCGATAAGTTTTGTGCTAAAGTGCAAATAGAAAAGGGTGTATACGATGGACGGGTGCTTAAGGCTGTTGAATATGAAGATATCTGTAAACTTGCATCATAA 1347 44.54 MEEALPSKSSSHSRLQPQFSFRGLLLRFSSVPPLPLSRSVSPPHPSSIFYSLVATVIMSPSSISQPLAAEGLLTSQGNFENLNGEERISNPQSDRKQNQGKRAPEAQMIFGQNPHRIVEGYSEEFERSFMEHIKRSHRFSRVAATVVYNEYINDRHHIHMNSTQWATLTEFVKHLGRTGQCKVDETPKGWFITYIDRDSETLFKEKMKNKRMRADLAEEEKQEREIQKQIERAEQLAPLASVSAEPLEAEQTRELKLDSGVKLGFSLGTTSKLKEKGESSRVVFDEDENGETAKGKPGETSKNKMGSGGLSALEALMREEEMKKEKINRKDYWLCEGIIVKVMSKNLAEMGYYKQKGVVRKVIDKYVGEIETLDGKHVLRVDQEELETVIPQIGGLVRIVNGAYRGSNARLLGVDTDKFCAKVQIEKGVYDGRVLKAVEYEDICKLAS 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10852825 10854738 - Carg15565-RA Car11g01313 157266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01313 448 MobiDBLite consensus disorder prediction 277 308 - -
Car11g01313 448 Pfam Domain of Kin17 curved DNA-binding protein 108 230 IPR019447 -
Car11g01313 448 MobiDBLite consensus disorder prediction 277 298 - -
Car11g01313 448 MobiDBLite consensus disorder prediction 81 97 - -
Car11g01313 448 Pfam KN17 SH3-like C-terminal domain 329 382 IPR041330 -
Car11g01313 448 Coils Coil 207 236 - -
Car11g01313 448 MobiDBLite consensus disorder prediction 81 103 - -
Car11g01313 448 Coils Coil 310 330 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01313 Car-Chr11:10852825 Car19g00148 Car-Chr19:1299307 5.32E-06 dispersed
Car11g01313 Car-Chr11:10852825 Car02g01414 Car-Chr2:9285449 5.42E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01313 K13102 - csv:101216499 610.527