Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01352 ATGGAGTCACTCGTTGATGGTATGAGTTCTTTACTTAAAACTCAGAACCCGACATCTACAGTGAGGATTCTCGATTCGTCGTGCCACCTTTCTGCTAAACAATCAAGGGATGAAGCCAGTTCTTCGACATCCTACGTTACATCTCAGAATTGTGCCAAGAAACCTGTTCGTCATCCAAATGGTTCTTCTGTAAGTATTAAAAAACAACCCGGTTCGCAGCTTGAAGGTTCAACTGATGTGAAAAAACATACACATGTTTCCAATAAGGGGAAATCTGAGCTTGTAAACCCGACGGATGTTTCGTATAAATCGACTGAAACTTCTTTTCAGAAGAAGGTTCCTTTGGAGGGAGGTGGAGCAAAACCTCTTGTGAAGCATGGTATTGAAGATTCTAAGGATTGTTGTTCAAGTGGTTTGGAACAATCTGGAAATCGAGTATTAAACGCATTGAAAGGAGATTCCACAAAAACAAATGATCAACAAAAGTCTCAGCCAGATGAAATTTCTTGTCCAAGTCCTCAGAACAGCTTATATTCCACGACGTTATATGCCGAGGCCAAACAAAGTTTCTCAAACACAGAAGTCAGTGAATGTGCAAGCAGTATTAAAAAGTCTTGTGAAAGCATTGACATCACAAGTTCCTACGATCTCGACAAAAGCAGGAAAACAAGTGTTTACCGAGGCAGCACCGGCAGTGATATCAGTGATGAGAGCAACTCGAGTAGTTTAAGCAATGCCATGTATAAGCCCCATAAGGCAAATGATACAAGATGGGAAGCAATGCAAGTTGTGAGGTCTCATGATGGGATGTTAGGACTGAATCATTTCAGGTTGCTGCGGAGACTGGGATGTGGCGATATCGGTAGTGTCTATCTTTCGGAGTTAACCGGTACCAAAACTTATTTTGCAATGAAGGTTATGGATAAAGCTGCTTTGGCAAGTAGGAAGAAGCTTCTGAGGGCTCAGACCGAGCGCGAGATATTGCAATCTCTGGATCATCCTTTCCTTCCTACTTTGTATACACACTTCGAGACAGAGAAGTTCTCTTGCTTGGTAATGGAGTTTTGCCCAGGAGGCGACTTGCACGCGCTTAGGCAGAGGCAACCCGGAAAATTCTTCCCGGAGCATGCTGCAAGATTCTATGTGGCTGAAGTTCTTCTTGCATTGGAGTATCTGCACATGCTTGGGATAATCTATAGGGACCTAAAACCTGAAAATGTGTTGGTTAGAGATGATGGGCACATAATGCTATCTGATTTTGACCTGTCTCTTAGATGCGCGGTTTCCCCGACCCTTGTTAAGTCATCAAACACGGGTTTAGAATCTAAAAGCTCGGGCTACTGTGCTCAGCCTGCTTGCATTGAGCCGACTTGCATAATGCAGCCAGATTGTATCCAGCCAGCGTGTTTTACGCCTCGCTTCTTAAGCAGGCACAGGAAAGAAAAAAAGTCGAAACCAAAGAGTGAAGTATATCATCAAGTGAGCCCTCTACCGGAGCTCATTGCTGAGCCCACAAGTGCGAGATCGATGTCCTTTGTCGGTACACATGAGTACCTCGCACCTGAAATCATAAAAGGTGAGGGTCATGGCAGTGCTGTGGATTGGTGGACTTTCGGGATCTTTCTCTACGAGCTTTTGTTCGGTAGAACGCCATTCAAGGGAGCTGGGAACCGAGCTACTTTGTTTAATGTGGTTGGTCAGCCATTGAGATTTCCAGAGTCTCCTTCTGTGAGCTTTGCAGCAAGGGACTTGATCAGAGGCTTGCTCGTAAAAGAACCACAGCACCGTCTCGCTTATAGGCGTGGTGCTACCGAGATCAAACAACATCCGTTCTTCCAGAGCGTGAATTGGGCACTCATCCGCTGTGCCAATCCTCCAGAAGTGCCAAGAGTAGATGCCATTGATTTCTCTTCAAGAATGGAGACACCACACGCACCGGCAGGCGAAAAAACGTCGGGAGTCGATGTGAAGCCTTCAGGTAATTATTTAGAGATCGACTTCTTTTGA 2007 45.09 MESLVDGMSSLLKTQNPTSTVRILDSSCHLSAKQSRDEASSSTSYVTSQNCAKKPVRHPNGSSVSIKKQPGSQLEGSTDVKKHTHVSNKGKSELVNPTDVSYKSTETSFQKKVPLEGGGAKPLVKHGIEDSKDCCSSGLEQSGNRVLNALKGDSTKTNDQQKSQPDEISCPSPQNSLYSTTLYAEAKQSFSNTEVSECASSIKKSCESIDITSSYDLDKSRKTSVYRGSTGSDISDESNSSSLSNAMYKPHKANDTRWEAMQVVRSHDGMLGLNHFRLLRRLGCGDIGSVYLSELTGTKTYFAMKVMDKAALASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHALRQRQPGKFFPEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSNTGLESKSSGYCAQPACIEPTCIMQPDCIQPACFTPRFLSRHRKEKKSKPKSEVYHQVSPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCANPPEVPRVDAIDFSSRMETPHAPAGEKTSGVDVKPSGNYLEIDFF 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11072588 11075913 - Carg15605-RA Car11g01352 157305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01352 668 MobiDBLite consensus disorder prediction 34 77 - -
Car11g01352 668 MobiDBLite consensus disorder prediction 34 102 - -
Car11g01352 668 ProSiteProfiles Protein kinase domain profile. 276 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01352 668 MobiDBLite consensus disorder prediction 224 247 - -
Car11g01352 668 Pfam Protein kinase domain 277 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01352 668 Pfam Protein kinase domain 509 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01352 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 397 409 IPR008271 GO:0004672|GO:0006468
Car11g01352 668 MobiDBLite consensus disorder prediction 222 247 - -
Car11g01352 668 MobiDBLite consensus disorder prediction 150 174 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01352 Car14g00612 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01224 Car-Chr5:11483433 Car11g01352 Car-Chr11:11072588 3.92E-143 dispersed
Car11g01352 Car-Chr11:11072588 Car18g00579 Car-Chr18:6510796 0 dispersed
Car19g00644 Car-Chr19:7764953 Car11g01352 Car-Chr11:11072588 5.68E-104 dispersed
Car20g00154 Car-Chr20:868294 Car11g01352 Car-Chr11:11072588 3.30E-177 dispersed
Car11g01352 Car-Chr11:11072588 Car14g00612 Car-Chr14:3439977 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89193 PF00069 Pkinase 7.00E-36 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01352 K08286 - csv:101219962 1202.96