Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01357 ATGTCTTCTTCCACCTACTCCAATTCTCCTTGTGCAGCCTGCAAGTTCCTACGTCGAAAATGTCTCCCGAACTGCGTTTTCGCGCCGTATTTCCCGTCGGAGGAGCCACAAAAGTTCGCCAATGTTCACAAGATCTTCGGAGCTAGCAATGTCAGCAAACTACTAAACGAGGTCCAGCCACACCAACGAGAGGATGCCGTGAACTCGCTCGCTTACGAGGCCGAGGCGAGGATGAAAGACCCCGTCTACGGCTGCGTCGGCGCCATCTCGATCCTCCAAAGACAAGTCATCAAGCTTCAAAGAGAACTCGATGCTACCAACGCTAACCTCATTCGCTACGCCTGCAGTGAACTCCCCGCCCCGTCGTCATCGTCGTCGCAATATGCTCGGAGATCGTCATCGACAAGCCACGTCGGAAGCTCGTCGACCTCTAGCTATGGCCATTACTATTCTGGCCTCTACTTTTGTGGCCCTTGTGGAGATGACCATGACAAAGGAGAAGAACACAAGTAA 513 53.02 MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPAPSSSSSQYARRSSSTSHVGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 170
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 11112461 11112973 + Carg15610-RA Car11g01357 157310
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car11g01357 170 Coils Coil 89 109 - -
Car11g01357 170 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Car11g01357 170 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Car11g01357 170 MobiDBLite consensus disorder prediction 119 143 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Car04g02589 Car11g01357 CCT
Car04g02589 Car11g01357 ECH
Car11g01357 Car14g00607 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02784 Car-Chr4:21330378 Car11g01357 Car-Chr11:11112461 1.58E-50 dispersed
Car10g00093 Car-Chr10:418205 Car11g01357 Car-Chr11:11112461 1.13E-69 dispersed
Car11g01357 Car-Chr11:11112461 Car13g00709 Car-Chr13:8335544 1.28E-61 dispersed
Car19g00864 Car-Chr19:8993376 Car11g01357 Car-Chr11:11112461 1.60E-46 dispersed
Car11g00069 Car-Chr11:374319 Car11g01357 Car-Chr11:11112461 1.72E-69 wgd
Car11g01357 Car-Chr11:11112461 Car14g00607 Car-Chr14:3379792 6.00E-94 wgd
Car11g01357 Car-Chr11:11112461 Car18g00177 Car-Chr18:974033 1.11E-60 wgd
Car11g01357 Car-Chr11:11112461 Car04g02589 Car-Chr4:20334234 4.06E-69 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4332 PF03195 LOB 2.30E-42 No_clan Car TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01357 - - cpep:111792844 313.538