Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01374 ATGGCGGTTCTGCCTCTGCAGCTTTCTTGTGTGAGGACTATTGACAGTTCGTCTTCGCCATTGTTGAGAGGAGGTAAATCGTCGTTGTTTTGGGGAAGACATTTGCGCTTTGGAATTGGAGGTATTAGGGATGGTCCGGGAGTGAAAGCTGGATTCAATGGTCGAGGTTTTGAGGTTTTCGCTATGTCGGATGGCTCTTCTTCTTCGTATAAGATGAATCTCAATGAGTACTTGGTTACTCTCCAGAAACCGCTCGGCATTCGGTTCGCGATTTCCGTCGATGGAAGAATCTTCGTTCACTCGCTTAAGAAAGGGGGTAATGCTGAGAAGTCGAGAATAATCATGGTGGGGGACACTTTAAAGAAGGCGAGCGATTCTTCTGGCGTCAAGCTCGTTGAGATCAAAGACTTTGGAGATACACAGATGATGCTGAAGGAGAAAGCAGGGTCTTTTAGCCTGGTTCTTGAAAGACCTTTCACTCCTTTTCCGATTCAACATCTTCTGCTTTCAAATGATTTAGATATTTTATTTAATCGAGGTCGAGTACCTATTGCTACTTGGAAGAAAGAAGTTTTGGCATCAAATTTACAAACACCTGATGCAAACAGTGGGAATTCTGGCTTTGCAACTTTCTCCTCTAAGTTCTCAACATCATTAGGTTGGAAACTTCTAAATAATCAAAATGGAGATGTTAAATCACCCATGCAGAGAAACACTCTCACACCTCAGATCAGCCAGGTTGTTTGTATATTTACCGAAGAGGATCCTGGAGAAGGAGAATGGGCTCATGGGAGCTTTCCCATAGACGAATATGTCAAGGCATTAGAACGGTCTAAAGGGGAGCTATATTATGATCACTCTCGTGGTATGAGCTATAGTAAGATCACAGAGCAAATTTATGTGGGGTCATGTTTACAGACTGAAGCAGATGTTGAGGCTTTGTCAAATAACGTGGGAATCACCGCAGTTCTGAATTTTCAAAGTGCAACCGAGGCAGAAAACTGGGGGATTAGCTCCAAGTTAATCAATGAGTCGTGCCAAAAATATGATATTCTCATGATCAACTATCCTATTAGGGAAGGAGATTCTTATGATATGAGGAAAAAACTACCATTTTGTGTGGGCCTACTTCTACGACTGTTAAAAAAGAACCATCGAGTTTTTGTAACTTGTACCACCGGTTTTGATCGAGCTCCAGCAAGTGTGATTGCATATCTACACTGGATGACCGATACTTCTCTTCATGCAGCTTATAATTTTATCACCAGTTTGCATTCCTGCAAACCTGACAGGCCAGCAATTGCTTGGGCTACCTGGGATCTCATAGCAATGGTGGAACATGGAAGGCACGATGGACCTCCCACTCACGCCGTTACTTTTGTATGGAATGGTCAAGAGGGGGAGGATGTAAATTTGGTAGGAGATTTTACTGGTAACTGGAAAGAACCGGTCAAGGCTAGTCACAAGGGTGGGCCAAGATATGAAGTAGAAATGAAACTTCCTCAAGGGAAGTAA 1515 43.1 MAVLPLQLSCVRTIDSSSSPLLRGGKSSLFWGRHLRFGIGGIRDGPGVKAGFNGRGFEVFAMSDGSSSSYKMNLNEYLVTLQKPLGIRFAISVDGRIFVHSLKKGGNAEKSRIIMVGDTLKKASDSSGVKLVEIKDFGDTQMMLKEKAGSFSLVLERPFTPFPIQHLLLSNDLDILFNRGRVPIATWKKEVLASNLQTPDANSGNSGFATFSSKFSTSLGWKLLNNQNGDVKSPMQRNTLTPQISQVVCIFTEEDPGEGEWAHGSFPIDEYVKALERSKGELYYDHSRGMSYSKITEQIYVGSCLQTEADVEALSNNVGITAVLNFQSATEAENWGISSKLINESCQKYDILMINYPIREGDSYDMRKKLPFCVGLLLRLLKKNHRVFVTCTTGFDRAPASVIAYLHWMTDTSLHAAYNFITSLHSCKPDRPAIAWATWDLIAMVEHGRHDGPPTHAVTFVWNGQEGEDVNLVGDFTGNWKEPVKASHKGGPRYEVEMKLPQGK 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11232661 11236710 + Carg15628-RA Car11g01374 157327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01374 504 ProSiteProfiles PDZ domain profile. 78 159 IPR001478 GO:0005515
Car11g01374 504 Pfam Dual specificity phosphatase, catalytic domain 306 423 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00964 Car-Chr2:6786237 Car11g01374 Car-Chr11:11232661 3.54E-06 dispersed
Car11g01374 Car-Chr11:11232661 Car18g00844 Car-Chr18:9435129 1.18E-21 dispersed
Car11g01374 Car-Chr11:11232661 Car04g01476 Car-Chr4:8569215 8.45E-23 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01374 - - cmos:111435043 1024.62