Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g01379 | ATGAAGGAGAAGAGTGAAACTGGAGGTGGGTATGTGAGGGCAGATCAGATAGATCTGAAGAGCTTAGACGAGCAGTTGCAGAGACATTTGAGCAAAGCATGGACTATGGAGAAGAACAAGAGCAAGACGAGGAAGGCGGCGGCCGGCGGCGGCGGTGGTGGTGGAAAGCTGCCGATCACCAGGCAGGAATGGGAGATTGATCCTTCTAAACTCATCATCAAAAGCGTCATAGCTCGTGGTACTTTTGGAACTGTTCATCGTGGAATTTATGATGGTCAAGATGTTGCTGTTAAACTTCTTGACTGGGGTGAAGAGGGTCATAGGTCGGAGGCAGAAATCGCGTCGCTTAGAGCAGCTTTTACACAAGAAGTTGTTGTTTGGCACAAGCTTGACCATCCTAACGTTACGAAGTTTATAGGAGCAACAATAGGCTCCTCAGATCTACAAGTACAAACAGAAAATGGCCAAATTGGCATGCCGAGCAATATTTGTTGTGTCGTCGTTGAATATTGTCCTGGAGGTGCTCTCAAATCTTACCTCATAAAGAACCGGAGGAAAAAGCTGGCGTTCAAAGTAGTCGTCCAGCTAGCATTAGACCTTGCAAGAGGGTTAAATTCCAATACTGAATCTCTAGTCTTTTTTTGCGTTTCCCCACAGAGTTCCGAATTCTATCTGCAATTTTTTACTTGTGCTTTTAAACTCAAGGCGAGTACCATTTGTAGGTTGAGCTATCTTCACTCACAGAAGATTGTCCATAGAGACGTCAAGACAGAAAATATGCTTCTGGACAAAACAAGAACGGTAAAAATTGCAGACTTTGGCGTTGCTCGTGTCGAGGCCTCAAATCCCAATGATATGACTGGCGAGACTGGAACCCTTGGTTATATGGCTCCAGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTCTACAGCTTTGGCATCTGTTTGTGGGAAATATACTGCTGCGATATGCCGTATCCCGACCTTAGCTTCTCGGAAGTGACTTCAGCGGTTGTCCGACAGAATCTTCGGCCAGAGATTCCTCGGTGTTGCCCGAGCTCGCTTGCAAACGTAATGAAGCGATGTTGGGACGCTAACCCAGACAAGCGTCCAGAGATGGATGAGGTTGTAACCATGTTGGAAGCAATTGACACATCGAAGGGTGGAGGTATGATCCCCATCGATCAGTCTCAAGGCTGTTTTTGCTTCCGCAGGTACCGAGGTCCTTGA | 1239 | 46.57 | MKEKSETGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKSKTRKAAAGGGGGGGKLPITRQEWEIDPSKLIIKSVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVVVWHKLDHPNVTKFIGATIGSSDLQVQTENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLNSNTESLVFFCVSPQSSEFYLQFFTCAFKLKASTICRLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPIDQSQGCFCFRRYRGP | 412 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 11265175 | 11268807 | + | Carg15633-RA | Car11g01379 | 157332 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g01379 | 412 | SUPERFAMILY | Protein kinase-like (PK-like) | 60 | 385 | IPR011009 | - | |
Car11g01379 | 412 | MobiDBLite | consensus disorder prediction | 33 | 59 | - | - | |
Car11g01379 | 412 | Pfam | Protein tyrosine and serine/threonine kinase | 73 | 205 | IPR001245 | GO:0004672|GO:0006468 | |
Car11g01379 | 412 | Pfam | Protein tyrosine and serine/threonine kinase | 242 | 383 | IPR001245 | GO:0004672|GO:0006468 | |
Car11g01379 | 412 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 1 | 205 | - | - | |
Car11g01379 | 412 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 238 | 406 | - | - | |
Car11g01379 | 412 | ProSiteProfiles | Protein kinase domain profile. | 71 | 386 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car11g01379 | 412 | CDD | STKc_MAP3K-like | 77 | 383 | - | - | |
Car11g01379 | 412 | Gene3D | Transferase(Phosphotransferase) domain 1 | 171 | 399 | - | - | |
Car11g01379 | 412 | Gene3D | Phosphorylase Kinase; domain 1 | 59 | 154 | - | - | |
Car11g01379 | 412 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 250 | 262 | IPR008271 | GO:0004672|GO:0006468 | |
Car11g01379 | 412 | SMART | serkin_6 | 71 | 386 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car11g01379 | 412 | PANTHER | DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED | 1 | 205 | - | - | |
Car11g01379 | 412 | PANTHER | DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED | 238 | 406 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car06g01199 | Car-Chr6:8767005 | Car11g01379 | Car-Chr11:11265175 | 0 | dispersed | |
Car08g00296 | Car-Chr8:1895137 | Car11g01379 | Car-Chr11:11265175 | 2.73E-31 | dispersed | |
Car10g00124 | Car-Chr10:585232 | Car11g01379 | Car-Chr11:11265175 | 4.66E-111 | dispersed | |
Car11g00102 | Car-Chr11:582708 | Car11g01379 | Car-Chr11:11265175 | 4.22E-111 | dispersed | |
Car11g01379 | Car-Chr11:11265175 | Car17g01130 | Car-Chr17:8673176 | 2.04E-176 | dispersed | |
Car10g00123 | Car-Chr10:582369 | Car11g01379 | Car-Chr11:11265175 | 1.24E-110 | wgd | |
Car11g00101 | Car-Chr11:579938 | Car11g01379 | Car-Chr11:11265175 | 1.84E-102 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89195 | PF07714 | PK_Tyr_Ser-Thr | 1.10E-41 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g01379 | - | - | csv:101212631 | 707.983 |