Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01379 ATGAAGGAGAAGAGTGAAACTGGAGGTGGGTATGTGAGGGCAGATCAGATAGATCTGAAGAGCTTAGACGAGCAGTTGCAGAGACATTTGAGCAAAGCATGGACTATGGAGAAGAACAAGAGCAAGACGAGGAAGGCGGCGGCCGGCGGCGGCGGTGGTGGTGGAAAGCTGCCGATCACCAGGCAGGAATGGGAGATTGATCCTTCTAAACTCATCATCAAAAGCGTCATAGCTCGTGGTACTTTTGGAACTGTTCATCGTGGAATTTATGATGGTCAAGATGTTGCTGTTAAACTTCTTGACTGGGGTGAAGAGGGTCATAGGTCGGAGGCAGAAATCGCGTCGCTTAGAGCAGCTTTTACACAAGAAGTTGTTGTTTGGCACAAGCTTGACCATCCTAACGTTACGAAGTTTATAGGAGCAACAATAGGCTCCTCAGATCTACAAGTACAAACAGAAAATGGCCAAATTGGCATGCCGAGCAATATTTGTTGTGTCGTCGTTGAATATTGTCCTGGAGGTGCTCTCAAATCTTACCTCATAAAGAACCGGAGGAAAAAGCTGGCGTTCAAAGTAGTCGTCCAGCTAGCATTAGACCTTGCAAGAGGGTTAAATTCCAATACTGAATCTCTAGTCTTTTTTTGCGTTTCCCCACAGAGTTCCGAATTCTATCTGCAATTTTTTACTTGTGCTTTTAAACTCAAGGCGAGTACCATTTGTAGGTTGAGCTATCTTCACTCACAGAAGATTGTCCATAGAGACGTCAAGACAGAAAATATGCTTCTGGACAAAACAAGAACGGTAAAAATTGCAGACTTTGGCGTTGCTCGTGTCGAGGCCTCAAATCCCAATGATATGACTGGCGAGACTGGAACCCTTGGTTATATGGCTCCAGAGGTTCTCAATGGCAATCCATATAACAGGAAATGTGATGTCTACAGCTTTGGCATCTGTTTGTGGGAAATATACTGCTGCGATATGCCGTATCCCGACCTTAGCTTCTCGGAAGTGACTTCAGCGGTTGTCCGACAGAATCTTCGGCCAGAGATTCCTCGGTGTTGCCCGAGCTCGCTTGCAAACGTAATGAAGCGATGTTGGGACGCTAACCCAGACAAGCGTCCAGAGATGGATGAGGTTGTAACCATGTTGGAAGCAATTGACACATCGAAGGGTGGAGGTATGATCCCCATCGATCAGTCTCAAGGCTGTTTTTGCTTCCGCAGGTACCGAGGTCCTTGA 1239 46.57 MKEKSETGGGYVRADQIDLKSLDEQLQRHLSKAWTMEKNKSKTRKAAAGGGGGGGKLPITRQEWEIDPSKLIIKSVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVVVWHKLDHPNVTKFIGATIGSSDLQVQTENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLAFKVVVQLALDLARGLNSNTESLVFFCVSPQSSEFYLQFFTCAFKLKASTICRLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPIDQSQGCFCFRRYRGP 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11265175 11268807 + Carg15633-RA Car11g01379 157332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01379 412 SUPERFAMILY Protein kinase-like (PK-like) 60 385 IPR011009 -
Car11g01379 412 MobiDBLite consensus disorder prediction 33 59 - -
Car11g01379 412 Pfam Protein tyrosine and serine/threonine kinase 73 205 IPR001245 GO:0004672|GO:0006468
Car11g01379 412 Pfam Protein tyrosine and serine/threonine kinase 242 383 IPR001245 GO:0004672|GO:0006468
Car11g01379 412 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 205 - -
Car11g01379 412 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 238 406 - -
Car11g01379 412 ProSiteProfiles Protein kinase domain profile. 71 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01379 412 CDD STKc_MAP3K-like 77 383 - -
Car11g01379 412 Gene3D Transferase(Phosphotransferase) domain 1 171 399 - -
Car11g01379 412 Gene3D Phosphorylase Kinase; domain 1 59 154 - -
Car11g01379 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Car11g01379 412 SMART serkin_6 71 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01379 412 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 205 - -
Car11g01379 412 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 238 406 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01199 Car-Chr6:8767005 Car11g01379 Car-Chr11:11265175 0 dispersed
Car08g00296 Car-Chr8:1895137 Car11g01379 Car-Chr11:11265175 2.73E-31 dispersed
Car10g00124 Car-Chr10:585232 Car11g01379 Car-Chr11:11265175 4.66E-111 dispersed
Car11g00102 Car-Chr11:582708 Car11g01379 Car-Chr11:11265175 4.22E-111 dispersed
Car11g01379 Car-Chr11:11265175 Car17g01130 Car-Chr17:8673176 2.04E-176 dispersed
Car10g00123 Car-Chr10:582369 Car11g01379 Car-Chr11:11265175 1.24E-110 wgd
Car11g00101 Car-Chr11:579938 Car11g01379 Car-Chr11:11265175 1.84E-102 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89195 PF07714 PK_Tyr_Ser-Thr 1.10E-41 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01379 - - csv:101212631 707.983