Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01389 ATGGTTATGGAGGATAACGAGAGCTGTGGAAGTAGAGCGTACGGCTCCTTGTCGCCGGCGCAGTCTCGGCAACAGAGGCAGAAGTTTGAGGTCTACAATGAGGTTCTTCGCCGTCTGAAGGATTCCGTCAACGAGGAGACGCTTCAGCCTGGTTTCGATGACGAACTATGGCTTCACTTTAATCGCCTTCCTACTCGATATGCTCTCGATGTAAATGTGGAGAGGGCAGAAGATGTTCTCATGCATAAAAGATTATTGCAATATGCTCATGATCCTGCAAATCGACCTGCAATTGAAGTTCGCCTAGTGCAGGTCCAAGCCATTTCTGATGGGAATTCAGCTGATTTTGCTGCTTCCTGTCCTGTAAAAGACACAGATCATAATTCTTCAAATTTACCGAGCAGGCAGAGCATACATCCACCACCTGCCTTTGGGTCATCTCCCAACCTTGAAGCCCTCGCCCTTGAAGCTAATAATGCTCAGGATCAGGAGGTTGATCATTCCGTACATGCCAAAACACAATCTTTCCGGCCGATGCATGAAATAACTTTCTCTACGGATGACAAGCCAAAACTTCTCAGTCAGTTGACTTCCTTGCTTGCGGAGATTGGTTTGAACATCCAGGAGGCACATGCATTTTCCACTGTTGATGGTTACTCCTTGGACGTTTTTGTAGTTGATGGTTGGCCCTTTGAGGAAACAGAGCGATTGAAGACTGCGATAGAGAAGGAAATCATACAGGTTGAGAGGAAGGCTTGGCCAAATCATAAATCCTTTTCAATAAGGGAACGGGATATATCAATTAAACCTGATCCTGATCGTGTGGAAATTCCCACGGATGGGACTGATGTATGGGAAATTAATCCTAGACATCTGAAGTTCGAGCATAAAGTTGCATCTGGGTCATATGGAGATCTGTATAAAGGTACATACTGCAGTCAGGAAGTCGCTATTAAAGTCCTTAAACCTGAACGCGTAGATTCAGATATGCAAAGTGAGTTTGCCCAGGAGGTGTACATTATGAGAAAAGTCAGGCATAAGAATGTCGTACAGTTTATAGGTGCATGTACTAAACCTCCAAGCTTGTGCATAGTAACAGAATTTATGTCTGGTGGTAGTGTCTATGACTATCTACATAAACAAAAGGGCACTTTTAGGCTTCCATCCTTGCTCAAGGTAGCCATTGATGTTTCTAAGGGAATGAACTACTTGCACCAAAATAACATCATTCACAGAGATCTCAAGGCCGCTAATCTTTTGATGGATGAAAATGAAGTTGTCAAGGTTGCTGATTTCGGCGTCGCCAGAGTGAAAGCTCAATCAGGAGTCATGACTGCAGAAACTGGGACATATCGGTGGATGGCTCCTGAGGTTATTGAACACAAACCCTATGATCACAAGGCTGATGTTTTCAGTTTTGCAATTGTCTTGTGGGAGCTGCTTACTGGAAAGCTACCCTATGAATTCCTAACCCCATTACAAGCTGCAGTCGGAGTGGTACAAAAGGGCTTACGGCCTATTATTCCAAAGCACACTAATCCGAAGCTGGCTGAGTTGCTGGAAAAATGCTGGCAACAAGACCCCTCATGCAGGCCTGACTTCTCTGAAATTATCGACATATTGTTGCAGATAACCAAGGAAGTCGCAGAAGATGGCGACGAACGACGGAAGGAGAAGAGTGGAGGATTACTTTCTGTGTTGAGACGAAACCATCAATGA 1719 44.74 MVMEDNESCGSRAYGSLSPAQSRQQRQKFEVYNEVLRRLKDSVNEETLQPGFDDELWLHFNRLPTRYALDVNVERAEDVLMHKRLLQYAHDPANRPAIEVRLVQVQAISDGNSADFAASCPVKDTDHNSSNLPSRQSIHPPPAFGSSPNLEALALEANNAQDQEVDHSVHAKTQSFRPMHEITFSTDDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGYSLDVFVVDGWPFEETERLKTAIEKEIIQVERKAWPNHKSFSIRERDISIKPDPDRVEIPTDGTDVWEINPRHLKFEHKVASGSYGDLYKGTYCSQEVAIKVLKPERVDSDMQSEFAQEVYIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKQKGTFRLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFAIVLWELLTGKLPYEFLTPLQAAVGVVQKGLRPIIPKHTNPKLAELLEKCWQQDPSCRPDFSEIIDILLQITKEVAEDGDERRKEKSGGLLSVLRRNHQ 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11360686 11367137 - Carg26372-RA Car11g01389 157342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01389 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Car11g01389 572 ProSiteProfiles ACT domain profile. 181 253 IPR002912 -
Car11g01389 572 MobiDBLite consensus disorder prediction 551 572 - -
Car11g01389 572 Pfam Protein tyrosine and serine/threonine kinase 292 540 IPR001245 GO:0004672|GO:0006468
Car11g01389 572 Coils Coil 231 251 - -
Car11g01389 572 ProSiteProfiles Protein kinase domain profile. 292 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01389 572 MobiDBLite consensus disorder prediction 1 21 - -
Car11g01389 572 MobiDBLite consensus disorder prediction 123 143 - -
Car11g01389 572 MobiDBLite consensus disorder prediction 120 145 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01389 Car19g00592 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01389 Car-Chr11:11360686 Car16g01190 Car-Chr16:10064463 0 dispersed
Car01g01564 Car-Chr1:13026120 Car11g01389 Car-Chr11:11360686 5.43E-84 wgd
Car11g01389 Car-Chr11:11360686 Car19g00592 Car-Chr19:7307944 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89196 PF07714 PK_Tyr_Ser-Thr 1.90E-73 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01389 - - csv:101213048 1040.8