Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01403 GTTGAGCATGTTCGATCCGAGAGGAATTTACTTGCAGAGGTTGATAGTCGATGCATTGTAAAACTCTTCTATTCTTTTCAAGACTCTGAATTCTTATACCTTATTATGGAGTATTTACCTGGCGGTGACATTATGACATTACTAATGAGAGAAGACGTTCTGTCGGAGGATGTTGCTCGCTTTTACATAGCAGAGAGCGTTTTAGCTATTCATTCAATTCATCAGCACAATTATATACATAGGGATATAAAACCAGATAACCTGATACTAGATAAGAATGGCCATCTGAAGCTTTCAGATTTTGGCTTGTGCAAGCCTCTGGATGATAAGTATTCAAGTATACTTTTGAATGACGAAGATTTAACAGCCCAGCAGGCCAAAAGTGAAGGTCAAGGTCATACTGACACTAATGGATCCCAATGGATGATGCCAAAAGAACAAATTCAACAGTGGAAGCGTAATCGCCGTGCATTGGCTTTTTCAACTGTTGGGACCCTGGATTACATGGCACCTGAAGTATTGCTTAAGAAAGGATATGGGATGGAGTGTGATTGGTGGTCATTAGGGGCTATTATGTATGAAATGCTGGCTGGTTATCCTCCTTTTTGTTCTGATGATCCAAGGATGACTTTCCGCAAGATAATAAATTGGAGAACTTGCCTGAAATTTCCCGAGGAACCGAAAATCTCAGAGGAAGCCAAGGATCTTATCATTCACTTGCTATGTGATGTTGAAACCAGGTTGGGAACTCGAGGAGTAGAGGAAATAAAGGCACATCCATGGTTCAAAGGGATTCATTGGGATAAGCTGTACGAAATGGAAGCTGCGTACAAACCAACTGTCACAGGAGAACTAGACACTCAGAACTTTGAGAAATTTCCTGAAGTGAGCATGACAATAAACCTTGCATACAATTGA 918 40.63 VEHVRSERNLLAEVDSRCIVKLFYSFQDSEFLYLIMEYLPGGDIMTLLMREDVLSEDVARFYIAESVLAIHSIHQHNYIHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSSILLNDEDLTAQQAKSEGQGHTDTNGSQWMMPKEQIQQWKRNRRALAFSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLAGYPPFCSDDPRMTFRKIINWRTCLKFPEEPKISEEAKDLIIHLLCDVETRLGTRGVEEIKAHPWFKGIHWDKLYEMEAAYKPTVTGELDTQNFEKFPEVSMTINLAYN 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11520528 11521994 - Carg18128-RA Car11g01403 157356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01403 305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 78 90 IPR008271 GO:0004672|GO:0006468
Car11g01403 305 Pfam Protein kinase domain 2 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01403 305 ProSiteProfiles Protein kinase domain profile. 1 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01403 305 ProSiteProfiles AGC-kinase C-terminal domain profile. 263 305 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01403 Car-Chr11:11520528 Car17g00140 Car-Chr17:866008 1.58E-151 dispersed
Car12g00509 Car-Chr12:3373928 Car11g01403 Car-Chr11:11520528 2.07E-86 dispersed
Car11g01403 Car-Chr11:11520528 Car05g00155 Car-Chr5:804397 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89197 PF00069 Pkinase 4.70E-52 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01403 K08790 - csv:101222805 594.349