Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01412 ATGGGGATTTGTTGGGGTTCTCCTGTTGGTAATCATACCCCTAATACCACTGGACATCTCAGTTCAGTGGTATCCCAGACAACATCATCAACGGTCAGCAACATCTCGAAGAATAGTAATTTCTCGGTAGCAAGTGGAGATGAAGCTTTTCCAAATGGCCAGATTTTGCCCTCTCCAAATTTGAGAGAGTACAGTTTGGCAGAGCTCAAAGCTGCAACCAAAAACTTCAGAGCTGAGGCAATGCTTGGTGAAGGAGGTTTTGGCAAAGTTTACAAAGGTTGGCTCGAGGAGAAGGGCCATGGAAAGAAGGGAAATTCGATGGTTATTGCGGTGAAAAAGTTGAAATCTGATAGCTTGCAAGGAATTGAGGAGTGGCAGTCAGAAGTGGGCTTCTTAGGAAGACTTTCTCACCCAAATCTGGTGAAGCTGCTCGGTTACTGTTGGGAGGATCACGAGCTACTCCTCACTTATGAGTTCATGCAAAAGGGAAGTTTGGAAAACCATCTGTTTGGAAGGGGCTCAGCAGTTACACCACTAGAGTGGGATACTCGGCTTAAGATCGCCATAGGTGCCGCTCGAGGGCTGGCGTTCTTGCACACATCAGACAAGCAAGTAATTTATAGAGATTTCAAGGCTTCTAATATTCTGCTTGATGGGTCTTATACACCAAAGCTATCAGACTTTGGTTTGGCAAAATTGGGTCCTTCTGAAAGTAAATCTCATTTGTCGACTCGAGTTATGGGCACTAATGGTTATGCTGCCCCGGAGTATATATCCACAGGACATTTGTATGTCAAGAGTGACGTGTATGGTTTTGGAGTTGTACTGATCGAGATGTTAACGGGTTTACGTGCACTCGACGAAAACCGTCCAACCGGTCACGAAAACTTGGTGGATTGGATAAAGCCATACTTATCAGAGAGGAGGAAGCTGAAAAACGTGATGGACTTTCGGTTGGAAGGCAAGTATCCATCGAGATCAGCATTCCAAGTGGCTCAGCTTGCTCTCCAATGTATTGAGCAAGAACAGAAGAACAGACCAGCAATGAACGAGGTTGTCGAGACACTGGAACAGATCGAAGCTATGAACGACCGACCGAATGAGCCTAGAAACCGTTCGCCCCGCCAGCCTCTTCACCATAGCTCTCCACTTCACGTGAAGCAATATGGAGTCCATGCTAATCAAACATCACCCAGGTTGAGATAG 1206 46.1 MGICWGSPVGNHTPNTTGHLSSVVSQTTSSTVSNISKNSNFSVASGDEAFPNGQILPSPNLREYSLAELKAATKNFRAEAMLGEGGFGKVYKGWLEEKGHGKKGNSMVIAVKKLKSDSLQGIEEWQSEVGFLGRLSHPNLVKLLGYCWEDHELLLTYEFMQKGSLENHLFGRGSAVTPLEWDTRLKIAIGAARGLAFLHTSDKQVIYRDFKASNILLDGSYTPKLSDFGLAKLGPSESKSHLSTRVMGTNGYAAPEYISTGHLYVKSDVYGFGVVLIEMLTGLRALDENRPTGHENLVDWIKPYLSERRKLKNVMDFRLEGKYPSRSAFQVAQLALQCIEQEQKNRPAMNEVVETLEQIEAMNDRPNEPRNRSPRQPLHHSSPLHVKQYGVHANQTSPRLR 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11558882 11563368 - Carg18119-RA Car11g01412 157365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01412 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Car11g01412 401 ProSitePatterns Protein kinases ATP-binding region signature. 82 113 IPR017441 GO:0005524
Car11g01412 401 MobiDBLite consensus disorder prediction 362 401 - -
Car11g01412 401 Pfam Protein tyrosine and serine/threonine kinase 79 356 IPR001245 GO:0004672|GO:0006468
Car11g01412 401 MobiDBLite consensus disorder prediction 1 21 - -
Car11g01412 401 ProSiteProfiles Protein kinase domain profile. 76 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00133 Car-Chr6:827744 Car11g01412 Car-Chr11:11558882 5.11E-152 dispersed
Car11g01412 Car-Chr11:11558882 Car16g01205 Car-Chr16:10169819 6.99E-162 dispersed
Car11g01412 Car-Chr11:11558882 Car19g00613 Car-Chr19:7596477 1.64E-76 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89198 PF07714 PK_Tyr_Ser-Thr 7.60E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01412 - - csv:101210490 711.449