Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01418 ATGAACATGGTTTGGCTCCTTTTATCACTCCTTTATATCTCAGAAGGGAGCTCAGGACATGAGGTAGTGAAAGTTGGAGCTATATTTTCACTTGCTTCTGTCAATGGGAAAGTGTCCAAGATAGCCATAGAGGCTGCTGAGAGAGATGTGAATGCTGACCCAAGTGTTCTTGGTGGAAGGAAGCTATCCATATCTATTCATGATGCTAATTACAGTGGTTTTCTTGGTATCACAGGAGCAATGAAGTACATGACGTCTGGCACAGTTGCCATCATCGGTCCTCAAGATGCTACAATGGCACAGATACTCTCACATCTTTCAAATGAACTCCATGTCCCATTATTATCATACACAGCCTTGGACCCAGCACTTGCTACTCTGCAGTATCCATACTTCATTCAAACAGCTCCAAATGATCAGTTCCAAATGGCTGCAATTACAGACATTATTGGTTATTATGATTGGCATGACATAGTCGTCGTTTACACCGACGATGATCACTGTCGAAACGGTATGGTTGCATTAGGAGATAAACTAGAAGAGAGAAGCTTAAAAATTTCCTCTAAAGTGGCACTTCCCCCTTACCCAACAGCAACTAGAACAGAAGTTCGAGATGCACTTCTAAAGATAAAAACGATGGAATCTAGAGTGATCGTATTGTACACGTTCTCGAAAACAGGTTTCTTGGTTTTTGAAGTGGCTCAAAGCCTTGGAATGATGGGGGCTGGATTTGTTTGGATAGCTTCCAGTTGGTTGTCAACAGTAATAGATTCTTATTCACCACTTCCCTTGAAAACTACCAACTCCATCCAAGGAGTTCTTACGCTTCGGCTGCACACACCGAGTTCTAAAAGGAAGCGATCTTTTATATCTCGTTGGAACGAGCTGAGTAATGGCTCGGTTGGGTTGAATGCATACAGCCTATATGCATATGATACTGTTTGGATGATTGCAAAAGGATTAAAAGAGTTATTTGATCAAAATGGCACCATTTCCTTCTCCAAAGATGAACGTGTTGGTAGTCTTAGTGGAGAGAGCTTGGATTTTAGCTCACTAGGAATCTTTAATGAAGGAAAGGAACTGCTTAACAATGTATTGAACATCAACATGACTGGTCTGACAGGGCCTATTCAGTTTCTAGATAGATATCCTTTACATCCTTCATATGATATCTTAAATGTTGTGAAATCTGGTATGAAGAGAATTGGGTATTGGTCCAACTATTCCGGGTTATCTATCGTGACACCAGAAACGTTGTATGAACGATCAGCCAATCGTTCTACATCGTCCCAACAGTTAAGCAGCATAGTGTGGCCTGGGGGATCAAGAATAAAGCCTCGTGGTTGGGTTCTACCACTCGATGGAAGGCGGTTAAGAATTGGCGTTCCACATAGAGTTAGTTATCAGGAATTTGTGACACCGGGTAATGGTAATGGCACAATCAGAGGATACTGCATAGATGTGTTCACTGCTGCCATAAACTTGCTTCCATATGCAGTGAATTATGAGTTTGTTTTGTTTGGAGATGGTGAGAAGAATCCTAGCTACTTTGAGCTTGTAAATAATGTTGCATTGAAAGAATTTGATGCTGCTGTCGGTGACATTGCCATTGTGACTAGTCGGACAAAGGTTGTCGACTTTACACAGCCTTATATCGACTCGGGGTTGGTCGTTATGATCCTTGTCAAGAAGTTGAATTCAAGTCCTTTGGCATTCCTTCGCCCATTCACACCAATGATGTGGATTGCCACAGCAGCCTTTTTCCTCCTCATTGGATTAGTCGTGTGGATTTTGGAACATCGAAAAAACGATGAATTCCGCGGAAATCCCAGGACGCAACTTGTCACGATCCTCTGGTTTGGCTTCTCTACAATGTTTTTTTCACATAGAGAAAACGTCGTGAGCACGCTCGGACGTTGTGTGCTTGTCGTCTGGCTTTTCGTGGTTCTAATTATCAACTCAAGCTACACCGCTAGTCTAACATCCATATTCACAGTACAACAACTAGCCTCACCTATCACAGGAATTGATTCATTGATATCTAGCCATGTACCTATAGGATTCCAAGTTGGTTCATTTGCTGAAAGTTACTTAACTGAGCAACTTAACGTCCAAAAGTCTAGGCTAATTGCTCTTGGATCCCCAAAGGAGTATGCTGCTGCCCTAAAAAACGGAACGGTCGGAGCTATTGTCGACGAACAACCATACATCGACCTCTTTCTCACAGAGTACTGCGATTTTTCAATTAGGGGCCAACAGTTCACCAAAAGTGGATGGGGATTTGCATTTCCACGAGACTCTCCATTAGCAGTCGACTTATCGACCGCCATACTAACTCTATCAGAGAGCGGCCGCCTTCAAAAGCTTCACGATAAGTGGTTCTCAAGAAAGTCTTGCAGTTCTGGAGAATCCGATTTAGAACAGCTTCAGTTACAGAGTTTCATCGGTCTGTTCTCCATTTGTGCCGGCGTATGTTTACTCGCTCTTCTGCTTCACTTTTTCTTGACGATGTGCCAATTCAACCGCCAGTTGAAACGAGATCCAGAAGCTTCGCCGTCGACCAGCGGCAGTTCTACTTCTACCCCTACGCGTCTGCGGAAATTCTTGGCGTTTGCAGACAAAAAGAAGAATCGAAAGACGAGATATTCTAAAAGAAAGATCGAAGATAATAATACATTTCCGAATCAACGTCGAGAGGATTTTGTACATTGA 2712 42.74 MNMVWLLLSLLYISEGSSGHEVVKVGAIFSLASVNGKVSKIAIEAAERDVNADPSVLGGRKLSISIHDANYSGFLGITGAMKYMTSGTVAIIGPQDATMAQILSHLSNELHVPLLSYTALDPALATLQYPYFIQTAPNDQFQMAAITDIIGYYDWHDIVVVYTDDDHCRNGMVALGDKLEERSLKISSKVALPPYPTATRTEVRDALLKIKTMESRVIVLYTFSKTGFLVFEVAQSLGMMGAGFVWIASSWLSTVIDSYSPLPLKTTNSIQGVLTLRLHTPSSKRKRSFISRWNELSNGSVGLNAYSLYAYDTVWMIAKGLKELFDQNGTISFSKDERVGSLSGESLDFSSLGIFNEGKELLNNVLNINMTGLTGPIQFLDRYPLHPSYDILNVVKSGMKRIGYWSNYSGLSIVTPETLYERSANRSTSSQQLSSIVWPGGSRIKPRGWVLPLDGRRLRIGVPHRVSYQEFVTPGNGNGTIRGYCIDVFTAAINLLPYAVNYEFVLFGDGEKNPSYFELVNNVALKEFDAAVGDIAIVTSRTKVVDFTQPYIDSGLVVMILVKKLNSSPLAFLRPFTPMMWIATAAFFLLIGLVVWILEHRKNDEFRGNPRTQLVTILWFGFSTMFFSHRENVVSTLGRCVLVVWLFVVLIINSSYTASLTSIFTVQQLASPITGIDSLISSHVPIGFQVGSFAESYLTEQLNVQKSRLIALGSPKEYAAALKNGTVGAIVDEQPYIDLFLTEYCDFSIRGQQFTKSGWGFAFPRDSPLAVDLSTAILTLSESGRLQKLHDKWFSRKSCSSGESDLEQLQLQSFIGLFSICAGVCLLALLLHFFLTMCQFNRQLKRDPEASPSTSGSSTSTPTRLRKFLAFADKKKNRKTRYSKRKIEDNNTFPNQRREDFVH 903
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11594571 11599217 + Carg18113-RA Car11g01418 157371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01418 903 MobiDBLite consensus disorder prediction 846 865 - -
Car11g01418 903 MobiDBLite consensus disorder prediction 883 903 - -
Car11g01418 903 Pfam Bacterial extracellular solute-binding proteins, family 3 471 795 IPR001638 -
Car11g01418 903 Pfam Ligand-gated ion channel 796 824 IPR001320 GO:0015276|GO:0016020
Car11g01418 903 MobiDBLite consensus disorder prediction 846 903 - -
Car11g01418 903 Pfam Receptor family ligand binding region 41 396 IPR001828 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01418 Car19g00619 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car11g01418 Car-Chr11:11594571 Car20g00529 Car-Chr20:2910769 0 dispersed
Car01g01595 Car-Chr1:13172205 Car11g01418 Car-Chr11:11594571 0 wgd
Car11g01418 Car-Chr11:11594571 Car19g00619 Car-Chr19:7642635 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01418 K05387 - csv:101208602 1436.78