Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car11g01419 | ATGAGAGAGGTTGAAGGAAGAAGGCTATGCCAGGAGTTTTCAGCTGGGTATTATGGCCTTTGTACTGTTGGGGGAATGCTCAGTGCTGGGGCTACCCATCTTGCTCTTACGCCTCTTGATGTCTTGAAGGTTAATATGCAGGTGAATCCTATTAAGTACAATGGCATTTCTTCGGGTTTTTCGGTTCTTTGGAGGGAACAAGGTCCTTCATCCCTTTGGAGAGGTTGGTCCGGCAAGTTATTCGGATATGGCGTTCAAGGCGGGTTCAAATTCGGTCTCTACGAGTACTTCAAGAAGTCTTACTCTGATTTGTTGGAAGGCCACAGCAGAAGTTCCATATACTTTCTCAGTAGTGCTTCTGCTCAATTCTTTGCTGATGTTGCTCTCTGCCCTTTTGAAGCTGTCAAGGTCAGAGTCCAAACACAGCCCTATTATGCCAAGGGATTGGCTGATGGCTTTCCAAAGCTATACTACAGTGAAGGTCTTTCTGGGTAA | 495 | 46.06 | MREVEGRRLCQEFSAGYYGLCTVGGMLSAGATHLALTPLDVLKVNMQVNPIKYNGISSGFSVLWREQGPSSLWRGWSGKLFGYGVQGGFKFGLYEYFKKSYSDLLEGHSRSSIYFLSSASAQFFADVALCPFEAVKVRVQTQPYYAKGLADGFPKLYYSEGLSG | 164 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 11599927 | 11604744 | + | Carg18112-RA | Car11g01419 | 157372 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car11g01419 | 164 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 16 | 100 | IPR018108 | - | |
| Car11g01419 | 164 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 109 | 164 | IPR018108 | - | |
| Car11g01419 | 164 | Pfam | Mitochondrial carrier protein | 114 | 164 | IPR018108 | - | |
| Car11g01419 | 164 | Pfam | Mitochondrial carrier protein | 23 | 101 | IPR018108 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car11g01419 | Car-Chr11:11599927 | Car15g00765 | Car-Chr15:4337829 | 5.65E-56 | dispersed | |
| Car11g01419 | Car-Chr11:11599927 | Car11g01274 | Car-Chr11:10624424 | 6.35E-57 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car11g01419 | K15102 | - | csv:101219895 | 320.087 |