Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01485 ATGGCTTCTGTTCTCTTCCTTCTTCTTCTTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATTGATATTCTCGCTGAATCAAGAAGGACTGTATCTTCAGCAAGTCAAGCTCAGTCTCTCCGATCCTACTCAGTCCTTATCTTCATGGAACCCTCGCGATGATACTCCCTGCAACTGGTCCGGCGTCATCTGTGATTCCGTCTCTCGTTCTGTTGTCGCCGTCGACTTATCTGATTTCCAGCTCGCTGGACCTTTTCCGACCTTCTTTTGTCGACTTCCTTCTCTTTCTTCACTCTCTCTTTTCAATAATGCCATTAACGCTTCTCTTCCTGACGATCTTGCCTCCTGTTCTGGTCTCCAACGGCTTAACTTGTCGCAGAATTTTCTCGCTGGTTCTATTCCCGATGCGCTTTCCAAGATCACGAACCTTCGGTTACTGGATCTCTCTGGAAATAACTTTTCCGGGGAGATTCCGGTGAGTTTCGGTGAGTTTCGTTGGCTTGAGACGCTGAATTTGGTTGAAAATCTTTTGAATGGAACTATTCCGGGGAGTTTGGGTAATATTTCGAGTTTGAAAGAGCTTCAACTTGCGTATAATCCGTTTTTGCGGAGTGAGATACCGACTGCATTTGGGAACTTGACGAAGTTGGAGGTTCTTTGGCTTGCTAACTGTAATCTTGTCGATCGGATTCCGGATATTTTTGGCGGGATGACTCGGCTTAAGAATCTGGACTTGTCGAACAATAGACTCAGTGGCTCGATTCCGGTGTCAATCACTCATTTGAAAAGCTTAGTTCAGATTGAACTGTTTAACAACTCGCTCTCCGGCGAGTTTCCTTTGGGACTGTCGAATCTAACAGCACTGCGACGAATTGATGTGTCGATGAATCACTTAACTGGAACAATTCCGGATGATCTTTGTGCATTACAGCTTGAGTCGTTAAACTTGTTCGAGAATCGATTGGAAGGGCCATTGCCGGAGAGTATCGCCAGGTCCCCATATTTGAATGAGCTCAAATTGTTTAATAACAAGCTTAGCGGACAGTTACCCAGTAAACTCGGGCAAAACTCACCATTAGTGCATCTTGATGTTTCATACAACGGGTTTTCTGGCGCCATCCCGGAAAACTTGTGTGCAAAAGGGGCATTGGGAGAGCTTATATTGATTTACAACTCGTTTTCCGGGAAAATCCCTCCGAGTCTTGGAAAATGCACGAGCTTAAGCCGTGTTCGAATGAGGAACAACAAACTCTCGGGTTCAGTTCCAGATGATTTTTGGGGTTTGCACAACGTGTATTTACTTGAGCTCGTTGAAAATTCGCTCTCTGGGTCTATCTCTTCGAAGATATCTAGCGCCAAGAATCTCTCCATTTTGATGATCTCCGAAAATCAATTTTCAGGGTCAATTCCGGAGGAGATTGGTTCGTTAAGCAATCTGACTGAACTTTCAGGTAGTGAGAATATGTTTTCCGGTAAAATTCCGGGAAATTTAGTGAAGTTAAGCCAGTTGGGTAAACTCGATCTTAGCGATAACAAGCTTTCTGGTGAATTACCAAAGGGAATTGGAGCTCTGAAGAGGCTAAACGAGCTAAATTTGGCAAACAACAGGCTATCTGGGAATATCCCGAGTGAAATTGGAAGCCTACCTGTTCTTAATTATCTCGATCTTGCTAGTAACCATCTCAGTGGTAGCATACCTCTTGAATTGCAGAATTTGAAACTGAATTCGTTAAATCTGTCGAACAATCTCTTATCAGGAGCACTTCCTCCTCTTTATGCCGAGGAAATTTACAGAGATAGCTTTCTGGGTAATCCAGGTTTGTGTAAGAACACCCCAAGTCTTTGTCCTCGCATTGAAAAAGGCAAAAACCAAGGCTATTGGCTTCTCAAAGCCATTTTTCTACTCGCTATTGTTGTTTTTGCTGTTGGGGTCATTTGGTTCTTCTTTAAGTACAAGAAATTCAAGCAGAACAAGAATGGAATTGCGGTTTCCAAGTGGAAATCATTCCACAAACTTGGTTTCAGTGAATATGAAATCGCAGTCTCTCTCAGTGAAGACAAAGTCATCGGAAGTGGAGCATCCGGCAAAGTGTACAAAGTTGTGCTGAAAAACGGTGAGATCGTGGCCGTGAAGAAGCTATGGCAAGGAGCAAGGAAAGAAGACAACAGCTTGGATTCAGAGAAAGATGGATTTGAGGCTGAAGTTGAGACATTGGGGAAGATTCGCCATAAGAACATTGTCAGGCTATGGTGCTGCTGCAACACTAGCAACTGCAAGCTACTTGTTTACGAGTATATGCCTAATGGGAGCTTGGGAGATTTGCTGCACGGCAGCAGAAAGCGCTTTTTGGATTGGCCTACAAGGTATAAAGTAGCTTTGGATGCAGCTGAAGGGCTTTCTTACTTGCATCACGATTGTGCTCCTCCAATTGTTCATAGAGATATCAAATCCAACAATATATTGCTTGATTCTGAGTTTGGAGCTAGAGTTGCAGACTTTGGATTAGCTAAGTTCTTGAATTCTGGCAAGGACTCAGAGCCAATGTCTGTCATTGCTGGTTCTTGTGGGTATATTGCACCAGAATATGCTTATACATTAAGAGTAAACGAAAAGAGTGACATCTACAGCTTTGGAATGGTGATTTTAGAGCTGGTGACAGGGAGGCCTCCAAATGATCCAGAATTTGGAGATAAAAACTTGGCAAACTGGGTCTACACCACCGTCGACTGCAGAGGACTCGACCAAACAATCGATCCAAAACTCGGTTCGAAATACAAGGAAGAAATCTACCAAGTCCTCAACGTGGGACTTCTCTGCACAAGCTCACTCCCCATCAACCGTCCCTCGATGAGACGAGTCGTCAAACTGCTACAAGAGGCTGCAACAGAATCCAGACCCGCCATTGCTAGTAAGGAAACCAAACTTTCTCCACATTTTTCCTAG 2946 43.92 MASVLFLLLLRLLLLLLLLLPLIFSLNQEGLYLQQVKLSLSDPTQSLSSWNPRDDTPCNWSGVICDSVSRSVVAVDLSDFQLAGPFPTFFCRLPSLSSLSLFNNAINASLPDDLASCSGLQRLNLSQNFLAGSIPDALSKITNLRLLDLSGNNFSGEIPVSFGEFRWLETLNLVENLLNGTIPGSLGNISSLKELQLAYNPFLRSEIPTAFGNLTKLEVLWLANCNLVDRIPDIFGGMTRLKNLDLSNNRLSGSIPVSITHLKSLVQIELFNNSLSGEFPLGLSNLTALRRIDVSMNHLTGTIPDDLCALQLESLNLFENRLEGPLPESIARSPYLNELKLFNNKLSGQLPSKLGQNSPLVHLDVSYNGFSGAIPENLCAKGALGELILIYNSFSGKIPPSLGKCTSLSRVRMRNNKLSGSVPDDFWGLHNVYLLELVENSLSGSISSKISSAKNLSILMISENQFSGSIPEEIGSLSNLTELSGSENMFSGKIPGNLVKLSQLGKLDLSDNKLSGELPKGIGALKRLNELNLANNRLSGNIPSEIGSLPVLNYLDLASNHLSGSIPLELQNLKLNSLNLSNNLLSGALPPLYAEEIYRDSFLGNPGLCKNTPSLCPRIEKGKNQGYWLLKAIFLLAIVVFAVGVIWFFFKYKKFKQNKNGIAVSKWKSFHKLGFSEYEIAVSLSEDKVIGSGASGKVYKVVLKNGEIVAVKKLWQGARKEDNSLDSEKDGFEAEVETLGKIRHKNIVRLWCCCNTSNCKLLVYEYMPNGSLGDLLHGSRKRFLDWPTRYKVALDAAEGLSYLHHDCAPPIVHRDIKSNNILLDSEFGARVADFGLAKFLNSGKDSEPMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGMVILELVTGRPPNDPEFGDKNLANWVYTTVDCRGLDQTIDPKLGSKYKEEIYQVLNVGLLCTSSLPINRPSMRRVVKLLQEAATESRPAIASKETKLSPHFS 981
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11993793 11998045 + Carg18044-RA Car11g01485 157438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01485 981 ProSiteProfiles Protein kinase domain profile. 684 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01485 981 Pfam Leucine rich repeat 216 275 IPR001611 GO:0005515
Car11g01485 981 Pfam Leucine rich repeat 94 154 IPR001611 GO:0005515
Car11g01485 981 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Car11g01485 981 Pfam Protein kinase domain 686 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01485 981 ProSiteProfiles Leucine-rich repeat profile. 240 263 IPR001611 GO:0005515
Car11g01485 981 ProSitePatterns Protein kinases ATP-binding region signature. 690 713 IPR017441 GO:0005524
Car11g01485 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01156 Car-Chr3:9234438 Car11g01485 Car-Chr11:11993793 6.85E-21 dispersed
Car10g00604 Car-Chr10:3080700 Car11g01485 Car-Chr11:11993793 5.17E-20 dispersed
Car11g01485 Car-Chr11:11993793 Car18g00370 Car-Chr18:2281232 0 dispersed
Car11g01485 Car-Chr11:11993793 Car13g00509 Car-Chr13:7177936 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89201 PF00069 Pkinase 1.30E-45 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01485 - - csv:101208240 1601.26