Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01492 ATGGCACAGTTGCCGCCGAAGATCCCAAACATGCCGCCGAATAATTGGCCGGAAACCTTCCCCCCCACCACCACACTTCCGGTCACCCACCAAAATCCTTCATGGGTTGACGAATTTCTTGATTTCTCTTCCTCCAGACGAGGCTCTCACCGGCGCTCCGTTAGCGATTCGATCACATTCCTCGAAATGCCAATGCCGGAGGATGATTGTCAAGGCTCCGACGCGGCGCCGACGACGGGATCTGGCAACGAATTTGATAGATTTGACGACGACCAATTCCTGTCGATGTTTAATGACGAAATCTCCGCCGCTGTTGCGCCGACTTTGTCGTCGTCGAACACCTCCACGCCGTCCGATCACAACAGCATTAACGACGAGAAAGACGGCCAACAAAGCCGGAACAAAAACGAATCCGACGAAGTACAGAGTCAACAGCAATCCAAAATTCAAACGCAATCCAATTCGCCGGCGCCGGCGGCCTCCACCGATCGAATAACAGATCCCAAAAGAGTAAAAAGAATTCTGGCAAATCGGCAATCGGCGCAAAGATCACGAGTGAGGAAGCTTCAATACATATCGGAACTTGAACGAAGCGTCACGTCGTTGCAGGCGGAAGTATCGGTGCTGTCGCCGCGAGTGGCGTTTTTGGACCAACAGAGATTGCTTCTCAACGTCGACAACAGCGCTTTGAAGCAAAGAATCGCCGCCCTTGCACAAGATAAGATTTTTAAAGATGCTCATCAAGAGGCTCTCAAAAGAGAGATAGAGAGACTAAGACAAGTTTATCACCAACAAAACATCAAGAACAATGACAATCCACCGCCATCGTCACCACCTCCCACCGCCATCGCCACCGCCACCGTCACCGACGCCAAGCTTCCGAATGTAGATCAAAAGGGCCAAGTTCTCAACATCGTGGTTTAG 924 51.3 MAQLPPKIPNMPPNNWPETFPPTTTLPVTHQNPSWVDEFLDFSSSRRGSHRRSVSDSITFLEMPMPEDDCQGSDAAPTTGSGNEFDRFDDDQFLSMFNDEISAAVAPTLSSSNTSTPSDHNSINDEKDGQQSRNKNESDEVQSQQQSKIQTQSNSPAPAASTDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDQQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKNNDNPPPSSPPPTAIATATVTDAKLPNVDQKGQVLNIVV 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12037042 12039474 + Carg27157-RA Car11g01492 157445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01492 307 Coils Coil 248 268 - -
Car11g01492 307 MobiDBLite consensus disorder prediction 121 135 - -
Car11g01492 307 MobiDBLite consensus disorder prediction 1 30 - -
Car11g01492 307 MobiDBLite consensus disorder prediction 1 20 - -
Car11g01492 307 MobiDBLite consensus disorder prediction 44 88 - -
Car11g01492 307 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 172 187 IPR004827 GO:0003700|GO:0006355
Car11g01492 307 MobiDBLite consensus disorder prediction 136 161 - -
Car11g01492 307 Pfam bZIP transcription factor 169 213 IPR004827 GO:0003700|GO:0006355
Car11g01492 307 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 167 219 IPR004827 GO:0003700|GO:0006355
Car11g01492 307 MobiDBLite consensus disorder prediction 107 171 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car11g01492 Car20g00552 CCT
Car11g01492 Car20g00552 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00628 Car-Chr1:3695402 Car11g01492 Car-Chr11:12037042 1.78E-21 dispersed
Car01g01054 Car-Chr1:9925086 Car11g01492 Car-Chr11:12037042 6.47E-100 dispersed
Car02g00527 Car-Chr2:4117728 Car11g01492 Car-Chr11:12037042 4.14E-20 dispersed
Car04g01859 Car-Chr4:10767552 Car11g01492 Car-Chr11:12037042 1.75E-25 dispersed
Car09g00746 Car-Chr9:4438312 Car11g01492 Car-Chr11:12037042 1.73E-97 dispersed
Car11g01492 Car-Chr11:12037042 Car16g00353 Car-Chr16:2181773 2.23E-29 dispersed
Car20g00295 Car-Chr20:1706194 Car11g01492 Car-Chr11:12037042 1.63E-19 dispersed
Car01g00173 Car-Chr1:946336 Car11g01492 Car-Chr11:12037042 2.60E-158 transposed
Car18g00878 Car-Chr18:9724166 Car11g01492 Car-Chr11:12037042 2.32E-21 transposed
Car11g01492 Car-Chr11:12037042 Car20g00552 Car-Chr20:3049457 5.27E-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4343 PF07716 bZIP_2 2.20E-09 CL0018 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01492 - - cmax:111486081 561.992