Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car11g01492 | ATGGCACAGTTGCCGCCGAAGATCCCAAACATGCCGCCGAATAATTGGCCGGAAACCTTCCCCCCCACCACCACACTTCCGGTCACCCACCAAAATCCTTCATGGGTTGACGAATTTCTTGATTTCTCTTCCTCCAGACGAGGCTCTCACCGGCGCTCCGTTAGCGATTCGATCACATTCCTCGAAATGCCAATGCCGGAGGATGATTGTCAAGGCTCCGACGCGGCGCCGACGACGGGATCTGGCAACGAATTTGATAGATTTGACGACGACCAATTCCTGTCGATGTTTAATGACGAAATCTCCGCCGCTGTTGCGCCGACTTTGTCGTCGTCGAACACCTCCACGCCGTCCGATCACAACAGCATTAACGACGAGAAAGACGGCCAACAAAGCCGGAACAAAAACGAATCCGACGAAGTACAGAGTCAACAGCAATCCAAAATTCAAACGCAATCCAATTCGCCGGCGCCGGCGGCCTCCACCGATCGAATAACAGATCCCAAAAGAGTAAAAAGAATTCTGGCAAATCGGCAATCGGCGCAAAGATCACGAGTGAGGAAGCTTCAATACATATCGGAACTTGAACGAAGCGTCACGTCGTTGCAGGCGGAAGTATCGGTGCTGTCGCCGCGAGTGGCGTTTTTGGACCAACAGAGATTGCTTCTCAACGTCGACAACAGCGCTTTGAAGCAAAGAATCGCCGCCCTTGCACAAGATAAGATTTTTAAAGATGCTCATCAAGAGGCTCTCAAAAGAGAGATAGAGAGACTAAGACAAGTTTATCACCAACAAAACATCAAGAACAATGACAATCCACCGCCATCGTCACCACCTCCCACCGCCATCGCCACCGCCACCGTCACCGACGCCAAGCTTCCGAATGTAGATCAAAAGGGCCAAGTTCTCAACATCGTGGTTTAG | 924 | 51.3 | MAQLPPKIPNMPPNNWPETFPPTTTLPVTHQNPSWVDEFLDFSSSRRGSHRRSVSDSITFLEMPMPEDDCQGSDAAPTTGSGNEFDRFDDDQFLSMFNDEISAAVAPTLSSSNTSTPSDHNSINDEKDGQQSRNKNESDEVQSQQQSKIQTQSNSPAPAASTDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDQQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKNNDNPPPSSPPPTAIATATVTDAKLPNVDQKGQVLNIVV | 307 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12037042 | 12039474 | + | Carg27157-RA | Car11g01492 | 157445 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car11g01492 | 307 | Coils | Coil | 248 | 268 | - | - | |
Car11g01492 | 307 | MobiDBLite | consensus disorder prediction | 121 | 135 | - | - | |
Car11g01492 | 307 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Car11g01492 | 307 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Car11g01492 | 307 | MobiDBLite | consensus disorder prediction | 44 | 88 | - | - | |
Car11g01492 | 307 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 172 | 187 | IPR004827 | GO:0003700|GO:0006355 | |
Car11g01492 | 307 | MobiDBLite | consensus disorder prediction | 136 | 161 | - | - | |
Car11g01492 | 307 | Pfam | bZIP transcription factor | 169 | 213 | IPR004827 | GO:0003700|GO:0006355 | |
Car11g01492 | 307 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 167 | 219 | IPR004827 | GO:0003700|GO:0006355 | |
Car11g01492 | 307 | MobiDBLite | consensus disorder prediction | 107 | 171 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car11g01492 | Car20g00552 | CCT | |
Car11g01492 | Car20g00552 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car01g00628 | Car-Chr1:3695402 | Car11g01492 | Car-Chr11:12037042 | 1.78E-21 | dispersed | |
Car01g01054 | Car-Chr1:9925086 | Car11g01492 | Car-Chr11:12037042 | 6.47E-100 | dispersed | |
Car02g00527 | Car-Chr2:4117728 | Car11g01492 | Car-Chr11:12037042 | 4.14E-20 | dispersed | |
Car04g01859 | Car-Chr4:10767552 | Car11g01492 | Car-Chr11:12037042 | 1.75E-25 | dispersed | |
Car09g00746 | Car-Chr9:4438312 | Car11g01492 | Car-Chr11:12037042 | 1.73E-97 | dispersed | |
Car11g01492 | Car-Chr11:12037042 | Car16g00353 | Car-Chr16:2181773 | 2.23E-29 | dispersed | |
Car20g00295 | Car-Chr20:1706194 | Car11g01492 | Car-Chr11:12037042 | 1.63E-19 | dispersed | |
Car01g00173 | Car-Chr1:946336 | Car11g01492 | Car-Chr11:12037042 | 2.60E-158 | transposed | |
Car18g00878 | Car-Chr18:9724166 | Car11g01492 | Car-Chr11:12037042 | 2.32E-21 | transposed | |
Car11g01492 | Car-Chr11:12037042 | Car20g00552 | Car-Chr20:3049457 | 5.27E-42 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4343 | PF07716 | bZIP_2 | 2.20E-09 | CL0018 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car11g01492 | - | - | cmax:111486081 | 561.992 |