Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car11g01498 ATGGATAAGTCTACTGAATCAAATGGTCGAGGTGGTGGTATAGCTGCAGTCACAAATATTACTGTGGAAAAATCAGTGGAATTCTCATACGAAGAGCTTGCGAAGGCGACCGATAACTTTAGTTTGGCGAACAAAATCGGTGAAGGTGGTTTTGGATCGGTTTACTATGCAGAACTCAGAGGAGAGAGAGCAGCAATAAAGAAGATGGATATGGAAGCTACAAGGGAGTTCCTCGCCGAAATTAAAGTTCTAACACGCGTTCACCACTTGAACCTGGTGCGTTTGATCGGATATTGTGTTGAGAATTCTCTATTCCTAGTCTATGAGTTCATTGAGAATGGCAATTTAGGCCAACATTTACGTGGCACAGGTCGGGATCCGTTGCCCTGGCATACTAGGGTCCAAGTCGCGCTTGATTCAGCTCGAGGTCTTGAGTATATCCATGAGCACACCGTGCCCGTTTATATTCATCGTGATATCAAATCAGCCAATATATTGATTGACAAGAACTTTCATGGAAAGGTTGCAGATTTCGGGTTAACCAAGTTGACTGAAGTTGGTAATTCGTCTCTTCCCACTCGTCTTGTGGGCACATTTGGATATATGCCACCCGAATACGCACAATATGGTGACGTTTCTCCAAAGATCGACGTATATGCTTTTGGCGTCGTTCTTTACGAGCTTATTTCAGCCAAGGAAGCTGTGGTTAAGACAAACAGAGCCAGCGCGATTAACGAGTCAAAAGGCCTCGTCGCTTTGTTTGAAGATGTACTGAATCAACCCGACGCAAAGGAGAACCTACACAAACTAGTCGACCCAAGACTCAAAGAGAACTACCCGCTCGATTCGGTTTTCAAGATGGCTCAACTTGCCAGAGCATGTACACATGAGAATCCACAGCTACGCCCAAGCATGAGATCCATTGTGGTTGCTCTCATGACACTTTCTTCTGCAACAGAAGATTGGGATGTTGGCTCGTTCTACGAAAACCAAGCCCTCGTCAACTTAATGTCGGGAAGGTAG 1023 45.16 MDKSTESNGRGGGIAAVTNITVEKSVEFSYEELAKATDNFSLANKIGEGGFGSVYYAELRGERAAIKKMDMEATREFLAEIKVLTRVHHLNLVRLIGYCVENSLFLVYEFIENGNLGQHLRGTGRDPLPWHTRVQVALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHGKVADFGLTKLTEVGNSSLPTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKEAVVKTNRASAINESKGLVALFEDVLNQPDAKENLHKLVDPRLKENYPLDSVFKMAQLARACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVNLMSGR 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12075173 12082110 + Carg27151-RA Car11g01498 157451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car11g01498 340 Pfam Protein kinase domain 42 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car11g01498 340 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Car11g01498 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Car11g01498 340 ProSiteProfiles Protein kinase domain profile. 40 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01787 Car-Chr4:10210139 Car11g01498 Car-Chr11:12075173 4.27E-90 dispersed
Car11g01498 Car-Chr11:12075173 Car15g00207 Car-Chr15:1142382 1.85E-74 dispersed
Car11g01498 Car-Chr11:12075173 Car14g01142 Car-Chr14:10060333 2.54E-88 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89202 PF00069 Pkinase 1.40E-45 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car11g01498 - K13429 csv:101203576 643.654